Bradyrhizobium lupini: AB3L03_15005
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Entry
AB3L03_15005 CDS
T11005
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
blup Bradyrhizobium lupini
Pathway
blup03030
DNA replication
blup03410
Base excision repair
blup03420
Nucleotide excision repair
blup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3L03_15005 (polA)
03410 Base excision repair
AB3L03_15005 (polA)
03420 Nucleotide excision repair
AB3L03_15005 (polA)
03440 Homologous recombination
AB3L03_15005 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blup03032
]
AB3L03_15005 (polA)
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_15005 (polA)
Enzymes [BR:
blup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3L03_15005 (polA)
DNA replication proteins [BR:
blup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AB3L03_15005 (polA)
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AB3L03_15005 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3L03_15005 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
WHD_BrxR
Transposase_20
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XDI34088
LinkDB
All DBs
Position
3170159..3173239
Genome browser
AA seq
1026 aa
AA seq
DB search
MPKSSPKTTAQADTKAAAPKAAETKPAAATAAAKPVAAKAAGKGDHVFLVDGSGYIFRAY
HALPPMNRKSDGLQVNAVLGFCNMLWKLLREMPEDNRPTHLAIIFDKSEITFRNKIYPEY
KAHRQPAPDDLIPQFSLIREAVRAFDLPCLEQVGFEADDLIATYVRQACERGASATIVSS
DKDLMQLVTDCVTMYDTMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIG
IKTAAQLIVEYGDLEQLLFRATEIKQPKRREALIENAEKARISRQLVLLDDKVDLEVPLD
DLAVHEPDARKLIAFLKAMEFSTLTRRVAEFSQIDPANVDADPGYSSGASVFSPLPPSDV
VPAPGPGAPAQVPVGQRNPSASKEDKAASPKGAPISLAAAREEALRKLPVDRSKYQAIKT
LAELNAFIARIHDAGHVAVEIRGNSIDPMQADLCGIALALAPNEACYVPLAHKQSGGGAG
LFDAGLAPDQVKHTDAIEALRPVLESPGILKIGFDVKFTAVMLAQHGITLRNTDDAQLIS
YVLDAGRGSHALEQLSERWFGHAMLKDNELLGSGKGKITFDQVPIDKAASLSAEGADVTL
RVWRVLKPRLIAEHMTTVYETLERPLVAVLARMERRGISIDRQVLSRLSGDFAQTAARVE
AEIQQIAGEPVNVGSPKQIGDILFGKMGLSGGTKTKTGAWSTTAQVLDELAEQGHDLPKK
ILEWRQVSKLKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDG
RKIRRAFIATPGHKLVSADYSQIELRLLAEIADIPVLQQAFRDGLDIHAMTASEMFGVPI
KGMPSEIRRRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETR
DFCRSHGYVTTLFGRKMYYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRMEDA
LVQKKLSAQMLLQVHDELIFEVPDAEVEATLPVVQHVMQDAPFPAVLLSVPLHVDARAAN
NWDEAH
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagagctccccaaagaccaccgcccaagctgacaccaaggctgccgcgcccaag
gccgccgaaaccaagcccgctgcggcgacagctgctgccaagcccgttgccgcgaaggcg
gccggcaagggcgaccatgtcttcctggtcgacggttccggctacatcttccgcgcctac
catgcgctgccgccgatgaaccgcaagtccgacggcttgcaggtcaatgccgtgctcggc
ttctgcaacatgctgtggaagctgttgcgcgagatgcccgaggacaaccggccgacccat
ctggcgatcattttcgacaagtcggaaatcaccttccgcaacaagatctatcctgagtac
aaggcacaccggcagccggccccggacgatctgatcccgcaattttcgctgatccgcgag
gcggtgcgcgccttcgacctgccttgcctggaacaggtgggcttcgaggccgacgatttg
attgcgacctatgtacggcaagcctgcgagcgcggcgcaagcgcgacaatcgtgtcctcc
gacaaggacctgatgcagctcgtcaccgactgcgtcaccatgtacgacaccatgaaggac
cgccgcattggcatccccgaggtgatcgagaagtttggcgtgccgccggagaaggtggtg
gaagtgcaggccctggccggcgattccaccgataacgttcctggcgtgcccggcatcggc
atcaagaccgcggcgcagctgatcgtcgaatatggcgatctcgagcaactgctgttccgg
gccaccgaaatcaagcaaccgaagcggcgcgaggcgctgatcgagaacgctgagaaggcg
cgcatctcgcggcagctcgtattgctcgacgacaaggtggacctcgaagtccccctggac
gatctcgccgtccacgagcccgatgcgcgcaagctgatcgcgttcctgaaggcgatggag
ttttccacgctgacgcgccgcgtcgccgaattctcgcagattgacccggccaacgtcgat
gcagatcccggctattccagcggcgccagcgtcttctcgccgctgccgccttcggacgtc
gtgccggccccgggacccggcgcgccggcgcaagttccggtgggccagcgcaacccttcg
gcgagcaaggaggacaaggccgcgagtccgaagggcgcgccgatttcgctcgccgccgcg
cgggaagaggctttgcgcaagcttccggtcgaccgcagcaagtaccaggccatcaagacg
ctcgcggaattgaacgcgttcatcgcgcgcattcacgatgccggccatgtcgcggtcgag
atccggggaaactcgatcgatccgatgcaggccgacctctgcggtatcgcgctggcgctg
gcgccgaacgaggcctgctacgtgccgctggcgcacaagcagtccggcggcggcgccggc
ctgttcgacgcgggcctcgcgcccgaccaggtcaagcacactgatgcgatcgaagcgttg
cggccggtgctggaatcaccaggcattctcaagatcggcttcgacgtcaaattcaccgcg
gtgatgctggcgcagcacggcatcacactgcgcaacaccgatgatgcgcagctgatctcc
tacgtgctcgatgccggccgcggctcgcacgcgctggagcaactgtccgagcgctggttc
ggtcacgcgatgctcaaagacaacgagctgctcggcagcggcaagggcaagatcacgttc
gaccaggtgccgatcgacaaggccgcgtcgctgtcggcggaaggcgccgacgtgaccttg
cgcgtctggcgcgtgctgaagccgcgcctcatcgccgagcacatgaccacggtctacgag
acgctggaacgcccgctggtcgcggtgctcgcacgcatggagcggcgcggcatctcgatc
gatcgtcaggtgctgtcgcgtctctccggcgacttcgcccagactgcggcccgtgtcgaa
gccgagatccagcagatcgcgggcgagccggtcaatgtcggcagcccgaagcagatcggc
gacatcctgttcggcaagatgggactgtcgggcggcaccaagaccaagaccggcgcgtgg
tcgaccaccgctcaggtgctcgacgagctcgccgagcagggccacgacctcccgaagaag
attctggagtggcgccaggtctcgaagctcaaatcgacctacacggacgcgttgccgacc
tacgtgaatccccagacccaccgcgtccatacgacctacgcgctggccgcgaccacgacg
ggccggctgtcgtcgaacgagccgaatttgcagaacattccggtgcgcaccgaggacgga
cgcaagatccggcgcgccttcatcgcaacgccagggcacaagctcgtctccgccgactat
tcgcagatcgagctgcggctgctcgctgagatcgccgacattcccgtgctgcagcaggcg
ttccgcgacggtctggacattcacgccatgacggcatcggaaatgttcggcgtgccgatc
aagggcatgccgagcgaaatcaggcgccgcgccaaggcgatcaatttcggcatcatctac
ggcatttcggcgttcggcctcgccaaccagctcggcatcgcgcgcgaagaggcctccgcc
tacatcaagaaatacttcgaacgcttccccggcatccgcgcctacatggacgagacgcgc
gacttctgccggagccacggctacgtcaccacgctgttcggacggaagatgtactatccc
gacatcaaggcttcgaacgcctcggtgcgggccttcaacgagcgcgccgcgatcaacgcc
cggctccagggcaccgccgccgacatcatccgccgcgcgatgacgcggatggaggatgcc
ttggtccagaagaaattgtcggcgcagatgctgctgcaggtgcacgacgaactgatcttc
gaggtgccggacgcggaggtcgaggcgacgctccccgtcgtgcagcacgtgatgcaggac
gcgccgttcccggccgtgctgctctcggtgccgctgcatgtcgatgcacgcgcagcgaac
aattgggacgaggcacattga
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