Bradyrhizobium lupini: AB3L03_16890
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Entry
AB3L03_16890 CDS
T11005
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
blup Bradyrhizobium lupini
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blup03016
]
AB3L03_16890 (truB)
Enzymes [BR:
blup01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB3L03_16890 (truB)
Transfer RNA biogenesis [BR:
blup03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB3L03_16890 (truB)
Prokaryotic type
AB3L03_16890 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XDI34422
LinkDB
All DBs
Position
3591985..3593103
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AA seq
372 aa
AA seq
DB search
MTMDPAHGTIGGEEADQLDVQKNNFADMSGNSQPAQEPRRVNNDPRANKQKGNQPRRDRR
DVHGWVVLDKPIGMTSTQAVAVLKRLFNAKRAGHAGTLDPLASGGLPIALGEATKTVPFV
MDGRKRYRFTVCWGEERDTDDIEGRATATSDQRPTREAIEALLPRFTGVIQQIPPRYSAI
KVQGERAYDLARDGEIVELASRPVEIHRLSLVDQPDSDLAVFEAECGKGTYVRALARDMG
RILGTYGHICALRRTLVGPFGENDMIPLDQLEALCDRAASGEGSLADALMPVETALDDIP
ALAVTRADAARLHRGQAVLLRGRDAPTCSGTVYVTVAGRLLALAEVGNGEIIPKRVFNLT
GLTASADRNERN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggacccggctcacggcacgatcggcggcgaagaggccgatcagctcgacgtg
cagaagaataattttgcggacatgagcggcaattctcagcccgctcaagagccgcgccgc
gtcaacaacgatccgcgcgccaacaagcagaagggcaaccagccgcgccgcgaccgtcgc
gacgtccacggctgggtcgtgctcgacaagccgatcggcatgacctcgacgcaggccgtt
gccgtgctcaagcgcctgttcaacgccaaacgcgccggccatgccggcacgctagatccg
ctggcctccggcggcctgccgatcgcgctcggcgaggccaccaagaccgtccccttcgtc
atggacggccgcaagcgctaccggttcacggtgtgctggggcgaggagcgcgacaccgac
gacatcgagggccgggcgaccgcaacctcggaccagcgcccgactcgggaggccatcgag
gccctgctgccccgtttcaccggggtgatccagcagatcccgccgcgctattccgcgatc
aaggtccagggcgagcgcgcctacgacctcgcccgcgacggcgagatcgtggaactggcc
tcgcgcccggtcgagattcaccgattaagccttgtagatcaaccggatagcgacctggcc
gtgttcgaggccgagtgcggcaagggcacctatgtccgcgcgctggcccgcgatatgggc
cggattctcggcacttacggccatatctgcgcactgcggcggaccctggtcggcccattt
ggcgagaacgacatgattccgctggatcagctggaggctttgtgcgatagagccgcgtcc
ggcgagggtagcctcgccgacgcgcttatgcccgttgagaccgcgctggacgacatcccg
gcactggccgtcactcgggctgatgcggcaaggctccatcggggccaggccgttttgttg
cgcggacgggatgcgcccacttgtagcggcacagtctatgtcacggtggcaggccggctt
ctcgcgcttgccgaagtcggcaatggcgaaatcatccccaagcgtgtgttcaacctgacc
ggcctgactgccagcgccgatcgcaacgagagaaattga
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