Bradyrhizobium lupini: AB3L03_17930
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Entry
AB3L03_17930 CDS
T11005
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
blup Bradyrhizobium lupini
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blup03032
]
AB3L03_17930
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_17930
Enzymes [BR:
blup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB3L03_17930
DNA replication proteins [BR:
blup03032
]
Prokaryotic type
DNA Topoisomerases
AB3L03_17930
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB3L03_17930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XDI34599
LinkDB
All DBs
Position
3807890..3809059
Genome browser
AA seq
389 aa
AA seq
DB search
MMDQQNLGTIRPASADPAAIALAKALGQWPKPAGSGRPSPKKVFDAAPSTTVEALAKELG
LRLGDQNELTIRRVRRGKGYSFVRPNGVHIRDARTIRRLHSMAVPPAYREVRYSADPSTH
LQAVGRDAAGRLQYRYHADWEKVREQRKAHRLEKLVGALPKIRRKVSAFLSGDEPTREFA
LSAVIELIARTAIRPGNESYARLNGTRGATTLLKSNVSLEDDSFVLTFKAKGGKAVRKEC
DAAKLVRAIGILQGVPGKRMFQYRDPYGIVRAVSTTQVNAFLREIAGIKISLKDFRTLMA
SAVVVESLSRITPATSQRGRKKQVLEAIRGAADQLSNTPAICRKSYVHDTIVTAFEDGIL
ERFAATMKGQRSQARREQLLQQVVATAAV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcagcagaatctcgggacgatacggcccgcttcagccgatcctgcagccatc
gcgctggccaaagccctcggacaatggccgaaaccggccggttccggccgtcccagcccg
aagaaagtgttcgacgcggcgccgtcgacgacggtcgaggccctcgccaaggaactgggc
ctgcggctcggcgaccagaacgagctgaccatccgccgcgtcaggcgcggcaagggctat
tcgttcgtgcggcctaacggcgtccacatccgcgatgcccgcaccattcggcggctgcat
tcgatggcggtgccgccggcctatcgcgaggtgcgctactcggccgatccgagcacgcat
ctccaggcagtgggacgcgatgccgcgggccggctgcaatatcgctatcacgccgattgg
gagaaggtccgcgagcaacgcaaggcgcatcgcctggaaaagctcgtcggcgcgctgccc
aagatccggcgcaaggtctcggcgttcctgtcgggcgacgagccgacccgcgagttcgcg
ctctccgccgtcatcgaattgatcgcgcgcaccgcgatccgccccggcaacgaatcctat
gcccgtctcaacggcacccgcggcgccaccacgctgctgaagtccaacgtctcgctggaa
gacgacagcttcgtgctgaccttcaaggcgaagggcggcaaggcggtgcgcaaggagtgc
gacgcggccaagctcgtgcgcgccatcgggatcttgcagggcgttcccggcaagcgcatg
ttccagtatcgcgatccctatggcatcgtgcgcgcggtcagcaccacgcaggtgaacgcg
tttctgcgcgagatcgccggcatcaagatctcgctgaaggatttccgcacgctgatggcc
tctgccgtcgtcgtggaatcgctgtcgcggatcacgccggcgaccagccagcgcggccgc
aagaagcaggtgctggaggcgatccgcggcgctgccgaccagctctccaacacgccggcg
atctgccgcaagagctatgttcacgataccatcgtcaccgcgttcgaggacggcatcctg
gaacgcttcgccgcgaccatgaagggccagcgctcgcaggccaggcgcgagcagcttttg
cagcaggtggtggcgaccgcggcggtctga
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