Bradyrhizobium lupini: AB3L03_18410
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Entry
AB3L03_18410 CDS
T11005
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
blup Bradyrhizobium lupini
Pathway
blup00300
Lysine biosynthesis
blup00470
D-Amino acid metabolism
blup01100
Metabolic pathways
blup01110
Biosynthesis of secondary metabolites
blup01120
Microbial metabolism in diverse environments
blup01230
Biosynthesis of amino acids
Module
blup_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB3L03_18410 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB3L03_18410 (dapF)
Enzymes [BR:
blup01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AB3L03_18410 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
DUF2924
Motif
Other DBs
NCBI-ProteinID:
XDI34681
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All DBs
Position
3901166..3902041
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AA seq
291 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDMRDSTSKVTPDDARAVASPRGGVPYDQLMVLQKPRFD
GTEAFISIYNSDGSEAGACGNGMRCVVRRIFEKTGQTNATFETAAGLLNAWQGPAPDLYT
VDMGAPKFGWQDIPLDQEFRDTRYIELQIGPIDNPVLHSPSVVSMGNPHAIFWVDDVNAY
DLERFGPLLENHPIFPERANITLAHIVDPQHITIRTWERGAGLTRACGSAACATAVAAAR
LKRAERNVEITLPGGKLGIEWRERDDHVLMTGTATFEYEGRFDPALFAPVG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggccaaccacgcatttgccaagatgaacggcatcggcaacgagatcgtc
gttgtcgacatgcgcgattccacctcaaaggtcaccccggacgatgcccgcgcggtggca
tcgccgcgaggcggcgtgccctacgaccaactcatggtgctgcagaagccgcgcttcgac
ggcaccgaagcgttcatcagcatctacaacagtgacggctccgaggccggcgcctgcggc
aacggcatgcgctgcgtcgtgcggcgcatcttcgaaaagaccggccagaccaatgcaacg
ttcgagacggccgcgggcctgctcaatgcctggcagggtccggcgccggatctttatacg
gtggacatgggcgcgccgaagttcggctggcaggacattccgctcgaccaggaatttcgt
gacacccgctacatcgaattgcagatcggcccgatcgacaatccggtcctgcattcgccg
tcggtggtcagcatgggcaatccgcatgcgatcttctgggtcgatgacgtcaacgcctac
gacctcgagcgtttcggtccgctgctggagaaccatccgatcttcccggagcgcgccaac
atcacgctagcccatatcgtcgatccccagcacatcacgatccgcacctgggagcgcggc
gccggcctgaccagggcctgcggctcggccgcatgtgccacggcggtcgcggcggcgcgg
ctgaagcgcgccgagcgcaatgtcgagatcacgctgcccggcggcaagctcgggatcgaa
tggcgcgagcgcgacgatcacgtgctgatgacgggcacggcgaccttcgaatatgaaggc
cgtttcgatccggcgctgttcgcgccggtcgggtga
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