Bradyrhizobium lupini: AB3L03_19160
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Entry
AB3L03_19160 CDS
T11005
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blup Bradyrhizobium lupini
Pathway
blup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3L03_19160 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blup03019
]
AB3L03_19160 (recQ)
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_19160 (recQ)
Enzymes [BR:
blup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3L03_19160 (recQ)
Messenger RNA biogenesis [BR:
blup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3L03_19160 (recQ)
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB3L03_19160 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
ResIII
Fic-like_C
Motif
Other DBs
NCBI-ProteinID:
XDI28319
LinkDB
All DBs
Position
4070147..4072012
Genome browser
AA seq
621 aa
AA seq
DB search
MSSPSTAPLPAPAQGRDALSVLRSVFGLPGFRGAQGEIIRHVTGGGNCLVLMPTGGGKSL
CYQLPALLREGCGVVVSPLIALMRDQVAAMLEAGVNAAALNSSLTPQEASDIERRLIVGD
LDLLYVAPERLLTPRCLALLARAKVALFAIDEAHCVSQWGHDFRPEYVGLSIIAERFPDV
PRIALTATADELTRKEIVERLQLADSPHFVSSFDRPNIRYEIVDKRNAVSQLKDFMRERH
AGDAGVVYCLSRKRVEEVAAALDDAGIAALPYHAGLDSGVRSRNQDRFLNEDGIVIVATI
AFGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGKPSAAWMAYGLSDIVQQRRMIDE
SSGSDEFKRVSIGKLDALVGLAETPHCRRRRLLAYFGEIVMGEGCGNCDNCLTPPKMRDG
RVLAQKLLSCAYRTGQRFGAMHLIDVLIGRLTEKVTQFGHDKLTVFGIGRELNEKQWRTV
LRQLVAMGHLLSESESFGALKLTDSSRGVLRGETEVWLREEAPGVRIRSSRAKSRRSDLA
PAADAPQGDVDPELRARLRAWRSDIARARGVPAYVVLHDATIDGIVRAWPTTLDELRNVP
GIGDKKLEHYGDELLQIVRTR
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctccttccaccgctccgctgcctgcgccggcccagggccgcgatgcgctgtcg
gtgctgcgttcggtgttcggcctgcccgggttccgcggcgcgcagggcgagatcatccgg
cacgtcaccggcggcggcaattgcctggtgttgatgccgaccggcggcggcaagtcgctg
tgctatcaattgccggcgctgctgcgcgaaggctgcggtgtcgtggtgtcgcccttgatt
gcgctgatgcgcgaccaggtcgccgccatgctcgaagccggggtcaacgcggccgcgctg
aactcgtcgctgaccccgcaggaagcctccgacatcgagcggcgcctgatcgtgggtgat
ctcgacctgctctatgtcgcgccggaacggctgctgacgccgcgctgcctggcgctgctg
gcgcgggcgaaggtggcgctgttcgcgatcgacgaagcgcattgcgtctcgcaatggggc
catgatttccgccccgaatatgtcggcctgtcgatcatcgccgagcgctttcccgacgtg
ccgcgcatcgcgctgaccgcgactgccgacgaattgacccgcaaggagatcgtcgagcgg
cttcagcttgcagacagtccgcacttcgtctccagcttcgaccgtcccaacatccgttac
gagatcgtcgacaagcgcaacgcggtgtcgcagctcaaggatttcatgcgggagcgtcac
gcaggtgatgcgggcgtcgtttattgtctctcccgcaaacgggtcgaggaggtcgccgcg
gcgctcgacgacgccggcattgccgcgttgccctatcatgccgggctcgacagcggcgtg
cgctcgcgcaaccaggaccgcttcctcaacgaggacggcatcgtcatcgtcgcgaccatt
gccttcggcatgggcatcgacaagccggacgtgcgcttcgtcgcgcatctcgatctaccc
aagagcatcgaggcctattaccaggagacaggacgcgccggccgcgacggcaagccgtcg
gcggcctggatggcctacggtctctcggacatcgtgcagcagcgccgcatgatcgacgag
tcgagcggctccgacgaattcaagcgggtctcgattggcaagctcgatgcgctcgttggc
ctcgccgaaacgccgcactgccggcgccggcggctgctcgcctatttcggcgagatcgtg
atgggcgagggctgcggcaattgcgacaattgcctgacgccgccgaaaatgcgcgacggc
agggtgctggcgcaaaaactgctatcctgtgcctatcgcaccgggcagcgtttcggcgcg
atgcacctcatcgacgtgctgatcggacgcctgaccgagaaggtgacgcagttcggtcac
gacaagctcaccgttttcggcatcggacgcgagctcaacgagaagcagtggcgtacggtg
ctgcggcagctcgtggcgatgggacatttgctgagtgagagcgaatcgttcggcgcgctg
aagctgacggattcgtcgcgcggcgtgctgcggggcgaaacggaagtgtggctgcgcgaa
gaggcgcccggcgtccggatccgttcgagccgcgccaagtcccgccgcagtgatctggcc
ccggcagccgacgcgccgcagggcgatgtcgatcctgaattgcgcgcgcggctacgagcg
tggcgctcggacattgcccgcgcacgtggcgtgccggcctacgtcgtgctgcatgacgcc
accatcgacggcatcgttcgcgcatggccgaccacgctggacgaactgcgcaatgtgccc
ggcatcggagacaagaagctcgagcattacggcgacgagctgctgcagatcgtcaggacg
cggtag
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