Bradyrhizobium lupini: AB3L03_19920
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Entry
AB3L03_19920 CDS
T11005
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
blup Bradyrhizobium lupini
Pathway
blup03030
DNA replication
blup03430
Mismatch repair
blup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3L03_19920
03430 Mismatch repair
AB3L03_19920
03440 Homologous recombination
AB3L03_19920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blup03032
]
AB3L03_19920
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_19920
Enzymes [BR:
blup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3L03_19920
DNA replication proteins [BR:
blup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3L03_19920
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3L03_19920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
RuvB_N
AAA_5
AAA_14
AAA_18
RCF1-5-like_lid
AAA_assoc_2
AAA_19
TsaE
AAA_lid_RFC1
AAA_2
TraI_hel_assoc_N
AAA_33
AAA_24
TIP49
nSTAND3
SRP54
Rad17
SKI
RNA_helicase
AAA_28
CbiA
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
XDI28448
LinkDB
All DBs
Position
4224403..4226220
Genome browser
AA seq
605 aa
AA seq
DB search
MTDAGAPPNPESAGRASTPYRVLARKYRPSSFDDLIGQEAVVRTVSNAFETGRIPQAWIL
TGVRGVGKTTTARILARALNYEMPDGSVKGPTVQMPTLGVHCQAIMESRHMDVLEMDAAS
HTGVDDVRQINDSVRYAPASARYKVYIIDEVHMLSTAAFNAFLKTLEEPPEHAKFVFATT
EIRKVPVTVLSRCQRFDLRRVEADVLMKHLANIAAKENVEIEPEALGIIARAAEGSVRDS
LSLLDQAIAHAAGTVKADAVRQMLGLADRTRVIDLFDSLARGDIASAFREFRDQYDVGAD
PIVVLSDLAEFVNFVTRVKIVPATADNVAYGETERVRARDFASKISMRVLSRMWQMLLKG
ITEVQAATRPAAAAEMVLVRIAYVADLPTPDEAIKMLEQNGGGSPVVSGGSAARNAPAGP
VASAAPVRMPNSSPSSFGGGGARPQMATPAPDPQAATPVLRVTSFTQLVALAGQKRDLLT
KGALEGDMRLVRFEEGRLEVALEPNASKTMISDLARKFELWTGRRWTVIVSNEPGQPTLR
SVSQAAKQEHARTAEADPRVREVLSRFPGAKVVEVRRLAPEAPESDINADYGSDDPPDGS
DGDDL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgctggcgcccctcccaaccctgaaagcgccggccgggccagcacgccctac
cgggtgctggcgcggaaataccgtccttcctcattcgacgatctgatcggccaggaagcc
gtggtccgcaccgtctcaaatgcattcgagaccggtcgcattccgcaggcctggatcctc
accggcgtccgcggggtcggcaagaccaccactgcgcgcatccttgcccgcgcgctcaac
tacgagatgccggatggctcggtgaagggcccgacggtccagatgccgacgctcggcgtg
cattgccaggccatcatggaaagccggcacatggacgtgctggagatggacgcggcctcg
cacaccggcgtcgacgacgtccgtcagatcaatgacagcgtccgctacgcgccggccagc
gcccgctacaaggtctacatcatcgacgaagtccacatgctgtcgacggcggcgttcaac
gccttcctgaagacgctggaggaaccgccggagcacgccaagttcgtgttcgcaacgacc
gagatccgcaaggttccggtcacggtgctgtcgcgctgccagcgttttgacctgcgccgc
gtcgaggccgacgtgctgatgaagcatctggccaacatcgcggccaaggaaaacgtcgag
atcgagcccgaagcactaggtatcatcgcgcgcgccgcggaaggctcggtgcgcgattcg
ctctcgctgctcgatcaggcgatcgcgcatgcggcaggcaccgtgaaggccgatgccgtc
aggcagatgctggggctcgccgaccgcacccgtgtcatcgatcttttcgattctctggcg
cgtggcgacatcgcgtccgcgtttagggagttccgcgaccagtacgacgtcggcgccgat
ccgatcgtcgtgctctcggatctcgccgaattcgtcaatttcgtcacccgcgtgaagatc
gtgccggcgaccgccgacaacgtcgcctatggcgagaccgagcgcgtgcgcgcgcgggat
ttcgcctcgaagatctcgatgcgcgtgctgtcgcggatgtggcagatgctgctcaagggc
atcaccgaggtgcaggccgcgacgcggcccgccgcagccgccgagatggtgctggtgcgc
atcgcctatgtcgccgacctgccgacgcctgacgaagcgatcaagatgctggagcagaac
ggcggtggttcgccggtcgtgagcggcggcagtgccgcgcgcaacgcgccggccgggccg
gtggcgtccgcggctcccgttcgcatgccgaattcgtcaccgtcctcgttcggcggcggt
ggtgctcgtccgcagatggcaacacccgcgccggatccgcaagctgccacgcccgtgttg
cgcgtcacgagcttcacccagctcgttgccctggccgggcagaagcgcgacctcctgacc
aagggcgcgctcgaaggcgacatgcgcctcgttcgtttcgaggagggccggctggaagtc
gcgctcgagccgaacgcctccaagaccatgatttccgatctcgcgcgaaaattcgagctc
tggaccgggcgccgctggaccgtgatcgtctccaacgagccgggccagccgacgctgcgc
tcggtaagccaggcggccaagcaggaacatgcgcgcaccgccgaggccgatccgcgcgtg
cgcgaggtgctgtcgcggtttccgggtgcgaaggtcgtcgaggtccgcaggcttgccccc
gaggcgccggaatccgatattaacgccgactatggcagtgacgatccgcccgacggttcc
gacggcgacgatctctag
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