Bradyrhizobium lupini: AB3L03_19970
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Entry
AB3L03_19970 CDS
T11005
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
blup Bradyrhizobium lupini
Pathway
blup00300
Lysine biosynthesis
blup01100
Metabolic pathways
blup01120
Microbial metabolism in diverse environments
blup01230
Biosynthesis of amino acids
Module
blup_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB3L03_19970 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
blup01002
]
AB3L03_19970 (dapE)
Enzymes [BR:
blup01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
AB3L03_19970 (dapE)
Peptidases and inhibitors [BR:
blup01002
]
Metallo peptidases
Family M20
AB3L03_19970 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
XDI28456
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All DBs
Position
complement(4233532..4234698)
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AA seq
388 aa
AA seq
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MTDALSIARDLIRCPSVTPADAGALGVLEKALNAAGFTCHRVTFSEPGTADVDNLFARIG
TDGPHITFAGHTDVVPPGDESAWSVGAFSGEVKDGFLHGRGAVDMKGGIACSVAAVLEHL
AANDGKPRSDGKGSISFLITGDEEDVSINGTIKLLQWAAERGEKFDHCVLGEPSNVETLG
DTIKVGRRGSQSGTLYVDGVQGHVAYPHRAANPVPDIARLIVAISDEPLDHGSAQFQASN
LEFTSVDVGNTANNVIPGQARAKFNIRYNDNHTQASLRELVEMRLTKACGNRIRARIVWE
PSNSNVFVTKPGPFTDLAVSAIEEVTGRKPELSTSGGTSDARFISSYCPVIEFGLVGQTM
HQIDERVPVRDLERLTKVYRGILARYFG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgctctctcgattgcccgcgatctcatccgctgcccctcggtaacccccgcc
gatgccggtgcactgggcgtgctcgaaaaagccctcaatgcggcaggcttcacatgccac
cgcgtgactttcagcgagcccggcaccgccgacgtcgacaatctctttgcgcggatcggc
actgacgggccgcacatcacctttgccggccacaccgacgtggtaccgccgggcgacgag
agcgcctggagcgtcggcgcgttctcgggcgaggtgaaggacggctttctgcacggccgc
ggcgcggtcgacatgaaaggcggcatcgcctgttcggtcgccgcggtgctggagcatctg
gccgcgaacgacggcaagccgcgcagcgacggcaaaggttcgatctccttcctgatcacc
ggcgacgaggaagacgtctccatcaatggcaccatcaagctgctgcagtgggcggccgag
cgcggcgaaaaattcgaccattgcgtgctcggcgagccctccaatgtcgagaccctcggc
gacaccatcaaggtcggccgccgcggctcgcaatccggcacgctgtatgtcgacggcgtg
cagggccatgtcgcctatccgcaccgcgccgccaatccggtgcctgatatcgcgcggctg
atcgtggccatctcggacgagccgctcgaccatggtagcgcgcagttccaggcctccaac
ctcgaattcacctcggtcgacgtcggcaacaccgccaacaacgtcatcccgggacaagcg
cgcgcaaaattcaacatccgctacaacgacaaccacactcaggcgagcctgcgcgagctg
gtcgagatgcggctgacaaaagcctgcggcaaccgcattcgcgcccgcatcgtctgggag
ccctcgaactcgaacgtgttcgtgaccaagcccggcccgttcaccgatctcgcggtgtcc
gcgatcgaagaagtgacgggccgcaagccggagctgtcgacctcaggcggcacctcggac
gcgcgcttcatctcaagctattgcccggtgatcgaattcggcctggtcggccagaccatg
caccaaatcgacgaacgcgtgccggtcagggacctggagcggttgaccaaggtgtatcgc
gggattttggcgaggtattttgggtag
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