Bradyrhizobium lupini: AB3L03_26505
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Entry
AB3L03_26505 CDS
T11005
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blup Bradyrhizobium lupini
Pathway
blup03420
Nucleotide excision repair
blup03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB3L03_26505
03430 Mismatch repair
AB3L03_26505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_26505
Enzymes [BR:
blup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3L03_26505
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3L03_26505
MMR (mismatch excision repair)
Other MMR factors
AB3L03_26505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DEAD
DUF3553
Motif
Other DBs
NCBI-ProteinID:
XDI29605
LinkDB
All DBs
Position
complement(5578837..5581476)
Genome browser
AA seq
879 aa
AA seq
DB search
MIRMTEPSKITSQSVPDHQPAAGGIAARARASVGPQYLSGLNPEQREAVETLDGPVLVLA
GAGTGKTRVLTTRIAHILSQGRARPSEILSVTFTNKAAREMKHRLGQMLGHAVEGMPWLG
TFHSIGGRILRTHAELAQLKSNFTVLDVDDQVRLLKQLLQADNIDDKRWPARMLAGLIDG
WKNRGLTPSQVPSGEAAVFANGKGGKLYASYQERLKILNAADFGDLLLEDIRIFREHPDI
LRQYQQRFKFILVDEYQDTNVAQYLWLRLLSQAPTSFASPRVRGEVGSPGSAIARPSDPG
EGDSQQAELVEAAPHPDLLSASEARRDPASGENEQTRHVKNICCVGDDDQSIYGWRGAEV
DNILRFDHDFPGAKVIRLERNYRSTGHILAAASHLIAHNEGRLGKTLRTEDQDGEKVTVT
GSWDLEEEARGIGEEIEQIQRQGDKLNEIAILVRASYQMREFEDRFVTLGLPYRVIGGPR
FYERAEIRDALAYLRVINSPADDLAFERIVNTPKRGLGDATVQMLHDHARKRRIPLFEAA
RAVVETDELKPKARGSLRDVVAQFDRWRAQREVTSHTELAEIVLDESGYTEMWQKDRSAD
AAGRLENLKELVRSMEEFENLQGFLEHISLVMDRDSGADEDAVSLMTLHSAKGLEFDNVF
LPGWEEGLFPSQRTLDEQGRAGLEEERRLGHVGLTRARRRAKIYFATNRRIHGTWSTTIP
SRFLDELPAANVEITESKGGSAWGGTGGYGASRFDDMEAFGSTYSTPGWQRAQANRNRGG
GGGGNGGRGSFEEQASSFSSQSSSPDFGSFSSRRRGPLTIEGELVAKSTGTTSEFSLSDR
VFHQKFGYGRVTKIDGNKLTIAFDKAGEKKVVDSFVQRA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcatgaccgagccgagcaagatcacgtcccagagcgtccccgaccaccagccc
gcagccggcggcatcgccgcgcgtgcgcgcgcctcggtaggcccgcaatacctgtccggg
ctcaatccggagcagcgcgaggctgtggagacgctggacgggccggttctggtgctggcc
ggcgccggcaccggcaagacccgcgtgctgaccacgcgcatcgcccacatcctgagccag
ggccgcgcccgcccatccgaaatcctgtcggtgaccttcaccaacaaggccgcgcgcgaa
atgaaacatcggctcggtcagatgctcggccatgccgtcgaagggatgccgtggctcggc
accttccactccatcggcgggcgcatcctgcgcacccacgccgagctggcgcagctcaag
tcgaacttcaccgtgctcgacgtcgacgatcaggtccgactgctcaagcagcttctgcaa
gccgacaatatcgacgacaagcgctggccggcgcgcatgctggccgggctgatcgacggc
tggaagaaccgcggcctgacgccgtcgcaggtgccgtcgggcgaagccgccgtgttcgcc
aacggcaagggcggcaagctctatgcgagctaccaggagcggctgaagatcctgaacgcc
gccgatttcggcgatctgctgctcgaggacatccgcatcttccgcgagcacccggatatc
ctgcggcagtaccagcagcgcttcaaattcatcctggtcgatgagtatcaagacaccaac
gtcgctcaatatctgtggctgcggctgctgtcccaagcgccgacttcttttgcctctccc
cgcgtgcggggagaggtcggatcgcccggcagcgcaattgcgcgcccgagcgatccgggt
gagggggactctcagcaagctgagctcgtggaggcagcccctcatcctgaccttctcagc
gcgagcgaagctcgtcgcgaccccgcaagcggggagaacgagcagacgcgccacgtcaaa
aacatctgctgcgtcggcgacgacgaccagtcgatctatggctggcgcggcgcggaggtc
gacaacatcctgcgcttcgaccatgatttccccggcgccaaggtcatccgcctcgagcgc
aactaccgctcgacgggccacatcctcgccgccgcctcgcacctgatcgcccacaacgag
ggccggctcggcaagacgctgcgcaccgaggaccaggacggcgagaaggtcacggtaaca
ggctcttgggatctggaagaggaagcccgcggcatcggcgaggagatcgagcagatccag
cgccagggcgacaagctcaacgagatcgcgattctggtgcgcgcctcctaccagatgcgc
gagttcgaggaccgcttcgtcacgctcggcctgccctatcgcgtcatcggcggcccgcgc
ttctacgagcgcgccgagatccgcgatgcgctggcttatctccgcgtcatcaattcaccg
gccgacgatctcgccttcgagcgcatcgtcaacacgcccaagcgcggcctgggcgatgcc
accgtgcagatgctgcacgatcacgcccgcaagcgccgcatcccgctgttcgaggcggcg
cgcgcggtggtcgagaccgatgagctgaagccgaaggcgcgcggctccttgcgcgacgtc
gtcgcccagttcgaccgctggcgcgcccagcgcgaggtcacctcgcacaccgagctcgcc
gagatcgtgctcgacgagagcggctacaccgagatgtggcagaaggaccgttcggcggac
gccgcgggtcggctcgaaaacctcaaggagctggtgcgctcgatggaggagttcgagaac
ctgcaagggtttttggagcacatctcactggtgatggaccgcgacagcggcgccgacgag
gacgcggtgtcgctgatgacgctgcattcggccaaggggctggaattcgacaacgtgttc
ctgcccggctgggaggaaggcctgtttccgagccagcgcacgttggacgaacagggccgc
gccggcctcgaggaagagcgccggctcggtcatgtcggcctgacccgggcccgccgccgc
gccaaaatctattttgccaccaaccgccggatccacggcacctggtcgaccacgatcccc
tcgcgctttctcgacgaactgcccgcggccaatgtcgagatcacggaatccaagggcggc
tcggcctggggcggcaccggcggctacggcgcctcccgcttcgacgacatggaagcgttc
ggctccacctattcgaccccgggctggcagcgcgcccaggccaatcgcaatcgcggcggc
ggtggcggcggcaatggcggccgcggcagtttcgaggaacaggcctcgtcgttttcgtcc
cagtcgtcctcgcccgatttcggcagcttctcctcgcgccgccgcgggccgctgacgatc
gagggcgagctggtggccaaatccaccggcacgacctcggaattctccctctccgaccgc
gtcttccaccagaaattcggctatggccgcgtcaccaagatcgacggcaacaagctcacc
atcgccttcgacaaggcgggggagaagaaggtcgtggacagttttgtgcagcgggcgtga
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