Bradyrhizobium lupini: AB3L03_28810
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Entry
AB3L03_28810 CDS
T11005
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
blup Bradyrhizobium lupini
Pathway
blup03030
DNA replication
blup03430
Mismatch repair
blup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB3L03_28810
03430 Mismatch repair
AB3L03_28810
03440 Homologous recombination
AB3L03_28810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blup03032
]
AB3L03_28810
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_28810
Enzymes [BR:
blup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB3L03_28810
DNA replication proteins [BR:
blup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB3L03_28810
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB3L03_28810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XDI30004
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All DBs
Position
6064491..6065390
Genome browser
AA seq
299 aa
AA seq
DB search
MFQDASDLAAMAEVLGRSSDYRVLRRLVPRPRSMGVSGHEMRIGILLDTETTGLDHRKDE
VIELGMVKFGYTPDGRIIDVRDTFSAFNEPSEPIPAEITALTGITHEMVAGHRIDEAAVN
AFVDDSVVLVIAHNSGFDRKFSERYWPVFERKAWACSATEVQWRQHGFDGAKLGYLLNGA
GYFHQAHRAVDDCHALLEILDFDLPTTGAPALAVLLETARQKTIRIWAEQSPFELKDSLK
RRGYRWSDGTDGRPKSWYVDVCESALDTELAFLRTEIYLRDVEPRLQTLTAFTRFSCRI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacgcatcggatctggccgcgatggccgaggtactagggcgatcgagcgac
taccgggtgctccggcgcctggtgccgcggccgaggtcgatgggggtctccggacacgaa
atgaggatcggcatcctgctcgacaccgagaccaccggcctcgaccaccgcaaagatgaa
gtcatcgaactcggcatggtcaagttcggctacacgccggacgggcgcatcattgatgtc
agggacacgttctccgccttcaatgagccgtccgagccgatcccggccgagatcacggcg
cttaccggcatcacccacgaaatggtggccggccacaggatcgacgaggccgccgtgaac
gccttcgtcgatgattccgtggtcctggtcatcgcgcataacagtggattcgatcggaag
ttttccgaacgctactggcccgtcttcgagcggaaggcgtgggcatgctccgcgaccgag
gtccagtggcggcagcacggcttcgatggagcgaagctcggctaccttctgaatggcgcc
ggctattttcaccaggcgcaccgcgcggttgacgactgtcacgcgctgctcgagatcttg
gacttcgacctaccaacgaccggcgcgcccgcgctcgccgtcctgctcgagaccgcacga
cagaagaccatccggatctgggccgaacagtcgccgttcgaactcaaggattcgctgaag
cggcgcggctatcgctggagcgacggcacggacggtcggccaaagtcctggtacgtcgac
gtctgcgagtcggcgctggacaccgagctcgcgtttctccggaccgagatctacctgcgc
gacgtggagccgcgcctgcagacgctgaccgccttcacccgcttctcctgcaggatctga
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