Bradyrhizobium lupini: AB3L03_29070
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Entry
AB3L03_29070 CDS
T11005
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
blup Bradyrhizobium lupini
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blup03021
]
AB3L03_29070 (rpoH)
Transcription machinery [BR:
blup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB3L03_29070 (rpoH)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
XDI30047
LinkDB
All DBs
Position
complement(6111380..6112333)
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AA seq
317 aa
AA seq
DB search
MQDCNVAVAQTSLKTTAINRTESSPFGRYAGAIRRFEMLEHEQEQQLARRWQELGDQAAA
DALVTSHLRLAASVAKRYRGYGLPLADIISEANLGLVMAATRYEPGRGSRFSTYALWWIK
ATIHDYILRSWSLVKIGTTAAQKKLFFCLRREMRKLASETSSLTPEVADAIAKRLEVSPR
DVLEMDRRLNGDLSLNRLVSEDSETADWQSRLVDPSLTAEALLAEHDESEQQARALRAAV
DTLTSRERRVFEARRLNDRPATLEVLACELSISSERVRQIETCAFEKVKRAARRNLRPDR
SASNSEPEERNKQMEAA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcaggactgcaacgtagccgtcgcgcaaaccagtttgaaaaccacggcgatcaatcgg
acggagtcatccccgtttggacggtacgctggcgccatccgccgtttcgaaatgcttgaa
cacgagcaagagcagcagcttgcgcgccgctggcaagagctgggcgatcaagccgctgcc
gacgccctcgtgactagccatcttcggctcgccgcgagcgtggcgaagcgctatcgcgga
tatggtctcccgctcgctgacatcatctccgaagccaatctcggtctggtgatggccgca
acacgttacgagccgggtcgcggctcacgtttctcgacctacgcgctctggtggatcaag
gctacgattcacgattacattcttcgatcctggtcactggtcaagatcggaacgacggct
gcccagaagaagctgttcttctgtctcaggcgcgaaatgaggaagcttgccagcgagacg
tccagcctcacgccggaggtggccgatgccatcgctaagcggctggaggtttcgcctcgc
gacgttctggagatggaccgccgactgaatggcgacctgtcgctaaacaggctggttagc
gaagatagcgagacggcggactggcagtcgaggctggtcgacccatcgctgacggcggag
gcgctcctggccgaacatgatgaatctgagcagcaagcacgcgcgctgcgcgccgcagtg
gatactcttacgtcacgcgaacgacgcgtgttcgaggcgcgccggctaaacgaccgccct
gccacgcttgaagtcctggcgtgcgaactgtcgatctctagcgagcgcgtccggcaaatc
gaaacctgcgcctttgaaaaggtcaagcgggccgccaggaggaacctcaggccggacagg
tcggcatcgaattccgagccggaggagcgcaataaacagatggaagcggcatag
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