Bradyrhizobium lupini: AB3L03_33220
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Entry
AB3L03_33220 CDS
T11005
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blup Bradyrhizobium lupini
Pathway
blup03420
Nucleotide excision repair
blup03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB3L03_33220
03430 Mismatch repair
AB3L03_33220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_33220
Enzymes [BR:
blup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3L03_33220
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB3L03_33220
MMR (mismatch excision repair)
Other MMR factors
AB3L03_33220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
XDI30776
LinkDB
All DBs
Position
complement(6932986..6935043)
Genome browser
AA seq
685 aa
AA seq
DB search
MATYLDTLNAEQRRAVEHGVADGATVGAPLLVIAGAGSGKTNTLAHRVAHLIVAGSDPRR
ILLMTFSRRAAAEMAGRVERIARKVLGENNAAIMRDALTWAGTFHGIGARLLREYAERIG
VDPAFTIHDREDSADLMNLVRHERGLSKTECRFPAKGTCLSIYSRCVNAEMEIEKVLGAH
YPWCAGWAAELKGLFAAYVEAKQAQHVLDYDDLLLYWSQMMSDALIAEEIGGRFDHVLVD
EYQDTNRLQSSVLLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPQSFSPRAEMITL
DRNYRSTQPVLAAANGVIGLARERFTKNLWTDRSSAQKPQLVTVHDETDQARYIVEEVLA
NREQGALLKHQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHVKDVLALLRFTE
NPRDRVAGFRILHLLPGIGPATAQRVLDQMAESTDPLAALGQLPVPPRTGADWTGFVRTI
ENLRYSEWPADLERVRLWYEPHLDRLHEDSETRRADLMQLEQISSGYASREKFLTELTLD
PPDATSDKSGPPLRDEDYLILSTIHSAKGQEWKSVFVLNVVDGCMPSDLGAGTSAELEEE
RRLLYVAMTRAKDDLHLVVPQRFFTHGQQAKGDRHVYASRTRFIPEPLVYLFERTAWPKA
GAGAARTAAQGPKVDIGARMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacatatctggacacgctcaatgcggagcaacgccgcgccgtggagcatggcgtg
gccgatggtgcgaccgtgggcgcgcccctgctcgtcatcgccggtgcgggctccggcaag
accaacacgctggcccaccgcgtcgcgcatttgatcgtcgcgggcagcgatccgcgccgt
atcctcttgatgacgttctcgcgccgcgccgcggccgagatggccggccgggtcgagcgc
atcgcccgaaaagtgctcggcgagaacaatgccgcgatcatgcgcgacgcgctcacctgg
gccggcacgttccacggcatcggcgcacggttgctgcgcgaatatgccgagcggatcggc
gtcgatcctgccttcaccatccacgaccgcgaggattccgccgacctgatgaatctggtc
cggcacgagcgcggattgtcgaagacggagtgccgctttcccgccaaaggcacctgcctg
tcgatctactcgcgctgcgtcaatgccgagatggagatcgagaaggtgttgggggcgcac
tatccctggtgcgcaggctgggcggccgagctgaagggcctgttcgcggcctatgtcgag
gccaagcaggcccagcacgtgctggattacgacgacctgctgctctactggtcgcagatg
atgagcgatgcgctgatcgcggaagaaatcggcggccgcttcgatcacgtcttggtcgac
gaatatcaggacaccaaccgcctgcaatcctcggtcctgctggcgctgaagccggacgga
cgcggcctcaccgtcgtcggtgacgacgcgcagtcgatctattcgttccgcgccgccacg
gtccgcaacattctggattttccgcagagcttctcgccccgcgccgagatgatcacgctc
gaccgcaattaccgctcgacgcaacccgtgctggcggcggcgaacggcgtcatcggcctg
gcgcgcgagcgcttcacaaaaaacctctggaccgaccgcagctccgcgcaaaagccgcag
ctcgtcaccgtgcacgatgagaccgaccaggcccgttacatcgtcgaggaagtcctggcc
aaccgcgagcaaggcgcgctcctgaagcaccaggcagtgctgttccggacctcctcgcat
tcgggcccgctggagatcgagctgacccgccgcaacatcccgttcgtcaagttcggcggg
ctgaaatttctcgatgccgcgcatgtcaaggacgtgctcgcgctgctgcgcttcaccgaa
aatccgcgcgaccgcgtcgcgggatttcgcatcctgcatctcttgccgggcatcggaccg
gcgactgcgcagcgcgtgctcgaccagatggcggagagcaccgatccgctcgccgcgctc
ggccagctcccggtgccgccgcgcaccggcgcggactggaccggcttcgtccgcaccatc
gaaaatttgcgctattcggaatggccggccgatctcgaacgcgtgcggctctggtacgaa
ccgcatctcgatcgcctccacgaggattccgagacccgccgcgccgacctgatgcagctc
gagcagatctcgagcggctatgcctcgcgcgagaaattcctgaccgagctcacgctcgat
ccgccggatgcgaccagcgacaaatccgggccgcccttgcgcgacgaggactatctgatc
ctctccaccatccactccgccaagggccaggagtggaaatcggtgttcgtgctcaacgtc
gtcgacggctgcatgccgtcggatctcggcgccggcaccagcgccgagctcgaggaggaa
cgccgcctgctctatgtcgcgatgacgcgcgccaaggacgacctgcacctcgtggtgccg
cagcgcttcttcacccacggccagcaagccaagggcgaccgccacgtctacgcctcgcgc
acccgcttcatcccggagccgctggtctatctgttcgagcgcaccgcctggccgaaggct
ggggcaggcgcggcccgcacggcggcgcaagggccgaaggtcgacatcggggcgcggatg
cgcggaatgtggcggtaa
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