Bradyrhizobium lupini: AB3L03_33745
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Entry
AB3L03_33745 CDS
T11005
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
blup Bradyrhizobium lupini
Pathway
blup03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blup00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB3L03_33745 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blup03021
]
AB3L03_33745 (rpoB)
03400 DNA repair and recombination proteins [BR:
blup03400
]
AB3L03_33745 (rpoB)
Enzymes [BR:
blup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB3L03_33745 (rpoB)
Transcription machinery [BR:
blup03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB3L03_33745 (rpoB)
DNA repair and recombination proteins [BR:
blup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB3L03_33745 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XDI30865
LinkDB
All DBs
Position
7043693..7047808
Genome browser
AA seq
1371 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPQGGRSDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEPPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVYARIDRRRKLPVTSLMFALGLDGEAILSTFYKKIQYKRI
KEGWRVPFDANRFRGYSTINDLIDADTGKVVLEAGKKLTVRGARQMQEKGLKALRLSDAE
LVGNYIAEDLVNPKTGEIHAEAGEEITDKSIKVLNEHGYKELPLLDIDHVNVGAYIRNTL
AADKNMTREDALFDIYRVMRPGEPPTLDSAQAMFQSLFFDAERYDLSAVGRVKMNMRLDL
DAPDTQRTLRKEDILSVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKDGRVTDEVVYLSAMEEGRYTVAQANVPLDPKGRFTEDLVVCRHAGEVLPVTPDKVD
YMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARD
SGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPLVK
VGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTSIH
IEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPKGE
SPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIEREE
IERLAKDRDDEQAILDRNVYNRLAELLEGRQGIAGPKGFKKDTKITRAVLEEYPKSQWWL
FASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRK
IQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGW
ACAGLGKRIGQTVDAYLSKQDIRPLKETLKKVYGEDETIKSLNDNELIELGHNLSRGVPI
ATPVFDGAKEADIEEMLKLAGLDASGQSTVYDGRTGDAFDRKVTVGYIYMLKLHHLVDDK
IHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRT
KVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKVGPGTAEAAE
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacattcaccggtcgcaaacgcgttcgcaagttcttcggacacatcaag
gaagtggccgagatgccgaacctcatcgaggttcagaaggcgtcctatgaccagttcctg
atggtcgacgagccccagggcggtcgatcggacgagggcttgcaggcggtgttccgctcg
gtgttcccgatctccgacttctcgggcacctcgatgctggaattcgtccgctacgagttc
gagccgccgaaatacgacgtcgacgagtgccgccagcgcggcatgaccttcgcggccccc
ctcaaggtgacgctacgcctcatcgtgttcgatatcgacgaggaaaccggcgcgaagtcg
gtcaaggacatcaaggagcaggacgtctacatgggcgacatcccgctcatgacgatgaac
ggcaccttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccg
ggcgtgttcttcgaccacgacaagggcaagacccattcgtcgggcaagctgctgttcgcc
gctcgcgtgatcccgtatcgcggctcctggctcgacatcgagttcgacgccaaggacatc
gtctatgcgcgtatcgaccgtcgccgcaagcttccggtgacgtcgctgatgttcgcgctt
ggtctcgacggcgaggcgatcctcagcaccttctacaagaagatccagtacaagcggatc
aaggaaggctggcgtgttccgttcgacgccaatcgtttccgcggctactcgaccattaac
gacctgatcgacgccgataccggcaaggtcgtgctcgaagccggcaagaagctcaccgtg
cgcggtgcgcgtcagatgcaggagaaggggctgaaggcgctgcgcctctcggatgctgag
ctcgtcggcaactacatcgccgaggacctcgtcaatcccaagaccggcgagatccacgcg
gaagccggtgaagagatcaccgacaagtcgatcaaggttctcaacgagcacggctacaag
gagctgccgctgctcgacatcgaccacgtcaatgtcggcgcctacatccgcaacaccctc
gcggccgacaagaacatgacgcgcgaggacgcgctgttcgacatctaccgcgtgatgcgt
cccggcgagccgccgacgctggattcggcgcaggcaatgttccagtcactgttcttcgac
gccgagcgctacgacctctcggcggtcggtcgcgtcaagatgaacatgcgcctcgacctc
gatgcgcccgacacccagcgcacgctccgcaaggaagacatcctctccgtcatcaagacg
ctggtggatttgcgcgacggcaagggcgagatcgacgacatcgaccatctcggcaaccgc
cgtgtgcgttcggtcggcgagctcatggagaaccagtaccgcatcggcttgctccgcatg
gagcgcgcgatcaaggagcgcatgtcttcggtcgacatcgacacggtcatgccgcaggac
ctgatcaacgccaagccggcggccgccgccgtgcgcgagttcttcggctcctcgcagctc
tcgcagttcatggaccagaccaacccgctgtcggagatcacccacaagcgccgcctgtcg
gcgcttggaccgggcggtctgacccgcgagcgcgccggcttcgaggtgcgcgacgtgcat
ccgacgcattacggccgcatctgcccgatcgagacgccggaaggtccgaacatcggcctg
atcaactcgctcgcgaccttcgcgcgcgtgaacaagtacggcttcgtcgagacgccttac
cgcaaggtcaaggacggccgcgtcaccgacgaggtcgtgtacctctcggcgatggaagag
ggtcgctacacggtcgcgcaggccaacgtgccgctcgatccgaagggccgcttcaccgaa
gatctcgtggtctgccgtcacgccggcgaagtcttgccggtgaccccggacaaggtcgac
tacatggacgtgtcgccgaagcagctcgtttcggtcgcggccgcgctgatcccgttcctc
gagaacgacgacgccaaccgcgcgctgatgggctcgaacatgcagcgccaggcggtgccg
ctggttcgcgccgaggcgccgttcgtcggcaccggcatggaaggcgtggttgcgcgtgac
tcgggtgctgcgatcgcggcgcgccgttcgggcgtgatcgaccagatcgacgcaacccgc
gtcgtcatccgcgccacggaagatctcgatccgaccaagtcgggcgtcgatatctaccgg
ctgatgaagtaccagcgctccaaccagtcgacctgcatcaaccagcgtccgctggtgaag
gtcggcgacatcgtcaagaagggcgacatcatcgccgacggtccgtcgaccgatctcggc
gagctcgcgctcggccggaacgtgctcgtcgcgttcatgccgtggaacggctacaacttc
gaagactcgatcctgctctccgagcggatcgtgaaggaagacgtgtttacctcaattcat
atcgaagaattcgaggtgatggcccgcgacaccaagctcggacccgaggaaatcacccgc
gacattccgaacgtctcggaagaagcgctgaagaacctcgacgaagccggcatcgtgtac
atcggcgcggaagtgcgcgccggtgacatcctggtcggcaagatcacgccgaagggcgaa
agcccgatgacgccggaggaaaagctcctgcgcgccatcttcggcgagaaggcttctgac
gtccgcgacacctcgctgcgcgttcctccgggcgtgcagggcaccatcgtcgaagtgcgc
gtgttcaaccggcacggcgtcgacaaggacgagcgtgcgctggcgatcgagcgggaagag
atcgagcgtctggccaaggaccgcgacgacgagcaggcgatcctggaccgcaacgtctac
aaccgtcttgccgagctgctcgaaggacggcagggcatcgccggtccgaagggcttcaag
aaggacaccaagatcacccgtgcggtgctcgaggagtacccgaagtcgcagtggtggctg
ttcgcttcgccgaacgacaagctgatggccgagatcgaggccatgcggaagcagtacgac
gagtcgaagaaggggctggaacagcgcttcctcgacaaggtcgaaaagcttcagcgcggt
gacgaattgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaagcgcaag
atccagcccggcgacaagatggccggccgccacggcaacaagggcgtggtgtcgaagatc
gtgccgatcgaggacatgccgttcctcgaagacggtacgcatgccgacatcgtgctcaat
ccgctcggcgtgccctcgcgcatgaacgtcggacagatcctcgagacccatctcggctgg
gcctgtgccggcctcggcaagcgtatcggccagacggtcgatgcctatttgtcgaagcag
gacatccggccgctgaaggaaaccttgaagaaggtctacggcgaggacgagacgatcaag
tcgctcaacgacaacgagttgatcgagctcggccacaatctgagccgcggcgttccgatc
gcgacgccggtgttcgacggcgccaaggaagccgacatcgaggagatgctgaagcttgcc
ggtctggacgcttcgggccagtcgaccgtctatgacggccgcaccggcgacgccttcgac
cgcaaggtgacggtgggctacatctacatgctcaagctgcaccatctcgtcgacgacaag
atccacgcgcgttcgatcggtccgtactcgctcgttacccagcagccgctgggcggcaag
gcgcagttcggcggtcagcgcttcggcgaaatggaagtgtgggcgctcgaggcttacggc
gcggcgtacacgctccaggagatgctgaccgtgaagtcggacgacgtcgccggccgtacc
aaggtgtacgaggcgatcgtgcgtggcgacgacaccttcgaggccggtattccggaatcg
ttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgacttgcacaattcc
aaggtcggaccggggacggcggaagcggccgagtaa
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