KEGG   Bifidobacterium animalis subsp. lactis V9: BalV_1239
Entry
BalV_1239         CDS       T01843                                 
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
blv  Bifidobacterium animalis subsp. lactis V9
Pathway
blv03030  DNA replication
blv03430  Mismatch repair
blv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BalV_1239
   03430 Mismatch repair
    BalV_1239
   03440 Homologous recombination
    BalV_1239
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:blv03032]
    BalV_1239
   03400 DNA repair and recombination proteins [BR:blv03400]
    BalV_1239
Enzymes [BR:blv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BalV_1239
DNA replication proteins [BR:blv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BalV_1239
DNA repair and recombination proteins [BR:blv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BalV_1239
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 DEDDh_C SAM_MT
Other DBs
NCBI-ProteinID: ADG33827
LinkDB
Position
1475762..1476328
AA seq 188 aa
MKPASRIPMNYISLDLETTGFSAQNDRITEIGAVKVRDGKIVDRFTQLVNPGRRVSARIT
ELTGISNEMLEDQPVIEDILGDFIHWTENDRLVGHNTKFDLSFLIANAERVFSDSTRFSV
RPIDTMHIDRLLFPSERHRLVDLIQRYGIGDVEEHRALSDATQTYQCLEWQRRYIDTRSA
DISMRTCV
NT seq 567 nt   +upstreamnt  +downstreamnt
atgaagccagcatcgcgaatccccatgaattacatctcactcgatctggagacgaccggc
ttcagcgcacagaatgaccgtatcaccgagattggcgccgtcaaagtgcgcgacggcaag
atagtggatcggttcacgcagctcgtcaatcccggcaggcgcgtctccgcacgcataacg
gagctcacgggcatttccaacgagatgctcgaagaccagcccgtcatagaagacatactc
ggggatttcatacactggaccgagaatgaccgtttggtgggacataacaccaaattcgat
ctctcattcctcattgccaatgcggaacgtgtgttcagcgactccacacgcttttccgtg
cgtcccattgacaccatgcatatagaccgactgctgttcccctctgaacggcatcgtctt
gtcgatctgatccagcgttacggcattggcgatgttgaggagcaccgcgcgctttctgac
gccacgcagacgtaccaatgcttggaatggcagcggcgttatattgacacccgctcggca
gacatctccatgcgtacgtgcgtgtga

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