Bifidobacterium animalis subsp. lactis V9: BalV_1423
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Entry
BalV_1423 CDS
T01843
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
blv
Bifidobacterium animalis subsp. lactis V9
Pathway
blv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BalV_1423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blv03021
]
BalV_1423
03019 Messenger RNA biogenesis [BR:
blv03019
]
BalV_1423
Transcription machinery [BR:
blv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BalV_1423
Messenger RNA biogenesis [BR:
blv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BalV_1423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
PIP5K
Spore_III_AA
SAP
Motif
Other DBs
NCBI-ProteinID:
ADG34011
LinkDB
All DBs
Position
complement(1732135..1734138)
Genome browser
AA seq
667 aa
AA seq
DB search
MKLPELKEIAKELGLRGLSAKRKGDLVAAIEEARAKQSSAKSETAPAQAEQPAGHDDAVS
VPVRKTGARRVVRKAGEPKAVEESAAEQPTQVKEEGHAALPAEEEMTQIRGRRVRGKRRQ
MESADQAATNGETSAAEQLLSTLNLPEHAERGGEQPRRRRGAVDSLPTRRRAGAAAVREP
DAEAKPDLDDILSSLPLSANDDESDERHEEHAHRRGERGSRTNDRSNARADRENRQHRRN
RNERDYEEREEGNERRSRDERGNNRNERNNRNDRNERREENTEDLVEVGGIVDVLDSYAF
IRTSGYLPGPNDIYVSMGQIKKYGLRKGDAVRGYTRAPHEGERRNQRQKFMPLQSITLIN
GLSVEEAQDRPNFSKLTPLYPDERLRMETTPNRIIGRLIDIVSPIGKGQRGLIVSPPKAG
KTITLQNIANAIAVNNPEVHLMVVLVDERPEEVTDMERTVKGEIISSTFDRPASDHTIVA
ELAIERAKRLVELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGA
ARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPAVDINAS
GTRREELITNPQELPVLYSLRRLLGGLEPEQAYQTLVPRLKKTMTNADFFKAIVQQGNSS
LNGGSNN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcctgagctcaaggagatcgccaaggaacttggcttgcgcggtctttctgcg
aagcgcaagggcgacttggtggcagcgatcgaagaggcccgcgccaagcagtcgtcggcg
aagagcgaaacggcaccggcacaggcggaacagcccgcagggcacgatgatgcagtctcc
gttccggttcgcaagaccggtgcccgacgcgtggtgcgcaaggccggcgagccaaaggca
gtcgaggagtctgctgccgaacagcctacccaggtgaaggaggagggccatgccgccctg
cccgccgaagaggagatgacccagattcgcggtcgccgcgtgcgcgggaagcgccgtcag
atggaatctgcggatcaggctgcgaccaatggtgagacgtccgccgccgagcagctgctg
agcacgctgaatctgcccgagcacgcagagcgcggcggtgagcagccacgtcgccgtcgc
ggtgccgtggactcactgcccacgcggcggcgtgcaggagcggcggccgtgcgtgaaccg
gatgcggaagccaagccggatctagacgacattctctcgtcattgccgctgagtgcgaat
gacgacgagagtgacgaacgtcacgaggagcatgcgcatcgccgtggcgagcgcggaagc
cgcaccaacgaccgttcaaatgcgcgtgccgacagggagaaccgccagcaccgcaggaac
cgcaacgaacgtgactacgaggagcgtgaggagggcaacgaacgccgttcccgcgacgaa
cgtggcaataatcgcaatgagcgcaacaatcgcaacgaccgcaatgagcgtcgcgaggag
aacaccgaggatctcgtggaggtcggcggcatcgtcgacgtgctcgattcctacgcgttc
attcgcacttccgggtacctgcccggaccgaacgacatctatgtgtcgatggggcagatc
aagaagtacggcctgcgcaaaggcgatgccgtgcgcggttacacgcgtgcgccccatgag
ggcgagcgccgcaaccagcgtcagaagttcatgccgttgcagtcgatcacgctcatcaac
ggcctaagcgtggaagaggcacaggatcgcccgaacttcagcaagctcacgccgttgtac
cccgacgagcgcctgcgtatggagaccacgccgaaccgcatcatcggccgcctgatcgac
atcgtttcgccgatcggcaagggccagcgcggcctgatcgtctctccgccgaaagctggc
aagacgatcacgctgcagaacatcgccaatgcgatcgctgtgaacaatcccgaggtgcac
ctcatggtcgtgctcgtcgatgaacgcccggaagaggtcaccgacatggagcgcaccgtg
aagggtgagatcatctcgtccaccttcgaccgcccggcctccgaccataccatcgtcgcc
gagctcgccatcgaacgcgccaagcgcctggtggagctggggcaggacgtggtggtgctg
ctcgattccatgacgcgcctcgcccgtgcctacaacatcgcggcacctgcctcagggcgc
atcctctccggtggtgtggacgcccaggcactctacccgccgaagaagttcttcggtgcc
gcccgcaacatcgaaaacggcggttcgctcaccatcatctcgtcggccctggtggagacc
ggttcgaagatggacgaggtgatcttcgaggagttcaagggcaccggcaacatggagctg
cgtctgagtcgcgaactggccgacaagcgcctgttcccggctgtggacatcaatgcttcc
ggcacccgccgtgaggagctcatcacgaacccgcaggaacttccggtgttgtacagcctg
cgtcgcctgcttggcggcctggagcccgagcaggcctatcagacgctcgtgccgcgcctg
aagaagacgatgacgaatgcagacttcttcaaagcgatcgtgcaacagggcaacagctcg
ctgaacggcggctcgaacaactga
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