Bifidobacterium animalis subsp. lactis B420: W7Y_0005
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Entry
W7Y_0005 CDS
T02079
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
blw
Bifidobacterium animalis subsp. lactis B420
Brite
KEGG Orthology (KO) [BR:
blw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blw03032
]
W7Y_0005
03400 DNA repair and recombination proteins [BR:
blw03400
]
W7Y_0005
Enzymes [BR:
blw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
W7Y_0005
DNA replication proteins [BR:
blw03032
]
Prokaryotic type
DNA Topoisomerases
W7Y_0005
DNA repair and recombination proteins [BR:
blw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
W7Y_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFJ15766
LinkDB
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Position
5777..7894
Genome browser
AA seq
705 aa
AA seq
DB search
MADQPTDSAAESLESASNDPIDQNLEANGTDQNDEQLDDTLSPEHYDASDLRVLEGLEAV
RIRPGMYIGSTGPRGLHHLVYEIVDNSVDEALAGYATHIEVTILPDNGIRVVDDGRGIPV
DEVPGEGKSGVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTRVDVEVRRQGYY
WTQTYIDQHPTGPLERGRAMRDDESTGTSVTFWADPKIFETTIYDFETLRSRFQQMAFLN
KGLKITLTDMRQVDEARDEVAGDGDNTVEELHQTVTYQYKNGIKDYVAFLVKSRGSAPIE
PDVIDIESEDLTIGVSAEIAMQWTSAYSESVHTFANTIATTEGGTHEEGFRAALTSMINR
YARDKNILKDKDDNLSGDDVREGLTAVISVKLTNPQFEGQTKTKLGNSEAKTFVQRVMNE
KLGDWLDAHPNEAKNIIQKALEASRARLAAKKARENTRRKSIFESAGMPDKLKDCQSNDP
SECELFIVEGDSAGGSAIQGRNPLTQAILPLRGKILNTERASLDRMLKSDTIESLITAIG
GGYGEDFDLDKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMITAGYVYVAMPPLYR
LKWTKGPHDFVYTDAERDRVLAEGKANGRQLPKGEGIQRYKGLGEMSYQELWETTMDPDH
RILKQVHIEDALQADETFSMLMGDEVEPRRLFIQRNAHNARWIDA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcaaccaaccgattccgcagcggagtcgcttgagtcggcgagcaacgatccg
atcgatcagaaccttgaagccaacggcacggaccagaacgacgaacagttggacgacacc
ctgtctcccgagcattacgacgcgagcgacctgcgcgtgctcgaagggcttgaggccgtg
cgcattcgccctggcatgtacatcggttccaccggtccgcgaggcctgcaccacctggtc
tatgagatcgtcgacaactcggttgacgaggcgctggccgggtatgccacgcacatcgag
gtgacgatcctgcccgacaacggcattcgcgtggtcgacgacggccggggcattccggtc
gacgaagtgcccggcgaaggcaagtccggcgtcgagaccgtcatgacgaagctgcacgcc
ggcggcaagttcggcggcggcggttatgcggtgtccggcggtctgcacggcgtgggcatc
tcggtggtgaacgcgctctccacgcgcgtggacgtcgaagtgcgccgacagggctactac
tggacgcagacgtacatcgaccagcatcccaccggcccgctcgagcgcggacgtgcgatg
cgcgacgacgagtccaccggcacgtcggtcacgttctgggcagacccgaagatcttcgag
acgacaatctacgatttcgagaccctgcgcagcagattccagcagatggcgttcctgaac
aagggactcaagatcacgctcaccgacatgcgccaggtcgacgaggcgcgcgacgaagtg
gccggcgacggcgacaacacggtggaggagctgcaccagaccgtcacgtaccaatacaag
aacggcatcaaggactacgtggcgttcctggtgaagtcgcgtggttccgcgccgatcgag
ccggatgtgatcgacatcgagtccgaggacctcaccataggtgtttccgcggagatcgcc
atgcagtggacgtcggcatattcggaatccgtgcacaccttcgcgaacacgatcgccacc
accgagggcggcacccatgaggagggcttccgcgcggcgctcacgagcatgatcaaccgg
tatgcccgcgacaagaacatcctcaaagacaaagacgacaatctctccggtgacgatgtg
cgtgaaggcctgaccgcggtgatctcggtgaagctgacgaacccgcagttcgaaggccag
acgaagacgaagctcggcaactccgaggcgaagaccttcgtacagcgcgtgatgaacgag
aaactcggcgactggctcgacgcccatccgaacgaggcgaagaacatcatccagaaggcg
ctcgaggcatcgcgcgcccgcttggccgcgaagaaggcacgcgagaacacccgccgcaag
tcgatcttcgagtccgccggcatgcccgacaagctcaaggactgccagtcgaacgacccg
agcgagtgcgagctgttcattgtcgagggcgactcggcaggcggctcggccattcagggt
cgcaacccgctgacgcaggcgattctgccgctgcgaggcaagattctcaacaccgagcgc
gccagcctcgaccgcatgctgaagtccgacacgatcgagtcgctgatcacggcgatcggc
ggcggatacggcgaggacttcgacctcgacaaggtgcggtaccacaaggtgatcatcatg
gccgatgcagacgtcgacggcgcccatatcgccacgctcaacctcacgctgttcttccgc
tacatgcgccccatgatcacggccggctacgtgtatgtggccatgccgccgctctaccgt
ctcaagtggacgaagggcccgcacgacttcgtgtacacggacgccgaacgcgaccgcgtg
cttgccgaaggcaaggcgaacggacgccagctgccgaagggcgagggcattcagcgctac
aagggtctgggcgagatgagctaccaggagctgtgggagaccaccatggatccggaccac
cgcattctgaagcaggtgcatatcgaagatgccctgcaggccgacgaaacgttctccatg
ctcatgggcgacgaggtggagccccgccgtctgttcatccagcgcaacgcacacaacgcc
cgctggatcgacgcctga
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