Bifidobacterium animalis subsp. lactis B420: W7Y_1082
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Entry
W7Y_1082 CDS
T02079
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
blw
Bifidobacterium animalis subsp. lactis B420
Brite
KEGG Orthology (KO) [BR:
blw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blw03016
]
W7Y_1082
Enzymes [BR:
blw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
W7Y_1082
Transfer RNA biogenesis [BR:
blw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
W7Y_1082
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFJ16802
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All DBs
Position
complement(1238166..1239488)
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AA seq
440 aa
AA seq
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MHQEGPALDSVNKEPVLQTEPKEGVPEVTDTLAGFELICEQYAAVNTPLATDAERASGYR
YGHEDWLIQFKRDGAPIALLDPIALDEQGVDWNAFNEAVGDAEWILHDSRQDLPGFAQIG
LKPRRLFDTEIAAKLLGLHRVGLAYVTAHFLGITLAKEHSAADWSYRPLPRDWRNYAALD
VELLSDLERAMTHELKRQGKWEWAQEEFDYALHEGLQPPKPHPVPWMRISHINVLQRDRR
GLAVAKALWTERDRLAREYDISPSLLLADSAIIEAAQRKPHNASQFRAVRSLNERVRMHL
GNEQDKMFERYAPIQRKVKPSLWKRTIQEALDLPSDELPELPGKAAGHGEDVVNAPRSAK
FWQTHEPKRYRQLQRCKAVLNQISQDTCTPTDVLLKPQILRNLCWTDHPHRRDVAQFLAQ
QGARPWQVDLLSESLSRAIM
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcaggagggacctgcgttggattcggtgaacaaggaaccggtgttgcagaccgag
ccgaaggaaggggttcccgaagtcaccgacaccttggctggcttcgaactcatctgcgaa
caatacgcagcggtgaacaccccactggccaccgatgccgaaagggccagtgggtaccgg
tacggccacgaggactggctcatccaattcaaacgcgacggtgcaccgatagcgctgctc
gatccgatcgccctcgatgaacagggtgtggattggaatgcgttcaatgaggctgtgggc
gacgcggaatggattctgcacgattcacgtcaggacctccccggattcgcccagattggc
ctgaagccgcgccggctgttcgataccgagatcgccgccaagctattggggctgcatcgg
gtcggcctcgcctatgtgacggcgcatttccttggcatcacgctggccaaggagcattcg
gcagccgattggtcataccgcccgttgcctcgcgattggcgcaactatgccgcactcgac
gtcgaattgctctccgatctcgagcgggcaatgacgcatgagctgaaacggcagggcaag
tgggaatgggcgcaggaggagttcgattatgccctgcacgagggattgcagcctcccaaa
ccgcatccggtgccgtggatgcgcatatcgcatatcaatgtgctgcaacgcgaccgtcga
ggactcgccgtggccaaggcgctatggaccgaacgggaccgactcgcccgcgaatatgac
atctcgccatcgttgctgttggcggattccgcgatcatcgaagcggcacagaggaagccg
cacaatgccagtcagttccgtgcagtgcgctcgctcaacgaacgggtgcgcatgcatctg
ggcaacgagcaggacaagatgttcgaacgctatgcgcccatccagcgcaaagtcaagccg
tcgctatggaaacggacaatccaggaggcgctggacctgccttccgacgagcttcccgag
cttcccggcaaagcggctggtcacggtgaggacgtggtgaatgcgccacggtctgcgaaa
ttctggcagacccatgagcccaaacggtaccggcagctccagaggtgcaaggccgtgctg
aaccagatctcgcaggacacctgcacccctaccgacgtgctgctcaagccgcagatcctg
cgcaacctatgctggacggaccatccacatcgtcgtgatgtggcccaattccttgcgcaa
caaggcgccagaccatggcaggtcgacttgctcagcgagtcgctgtcccgcgctatcatg
taa
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