Bifidobacterium animalis subsp. lactis B420: W7Y_1305
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Entry
W7Y_1305 CDS
T02079
Name
(GenBank) Very-short-patch mismatch repair endonuclease (G-T specific)
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
blw
Bifidobacterium animalis subsp. lactis B420
Brite
KEGG Orthology (KO) [BR:
blw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blw03400
]
W7Y_1305
DNA repair and recombination proteins [BR:
blw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
W7Y_1305
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
RAP
DUF559
Motif
Other DBs
NCBI-ProteinID:
AFJ17019
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All DBs
Position
1500043..1500426
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AA seq
127 aa
AA seq
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MSRIRGKDTSIEKTVRSYLFARGFRFRKNDKRYPGHPDIVLPKYRTIVFVNGCFWHMHEG
CESFHMPKSNVEFWAAKLTRNRDRDRRQHEQLRQMGWRVIDVWECELRGDAREARLERLV
GQIAEGV
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcatccgcggcaaagacacgtcgatcgagaagacggtgcgctcctatctgttc
gcgcgcgggttcagattccgcaaaaacgacaagcggtaccccgggcaccccgacatcgtg
ctgcccaagtaccgcacaatcgtgtttgtgaacggctgtttctggcacatgcacgagggg
tgcgagtcgttccatatgccgaagtcgaatgtggagttctgggcggcgaagctcacgcgc
aaccgagaccgcgaccgccggcagcacgagcagctgcggcagatgggatggcgcgtgatc
gacgtgtgggaatgcgagctgcgcggcgacgcacgcgaagcgcggctcgagcgacttgtg
gggcagattgcggaaggggtgtag
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