Bifidobacterium animalis subsp. lactis B420: W7Y_1338
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Entry
W7Y_1338 CDS
T02079
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blw
Bifidobacterium animalis subsp. lactis B420
Pathway
blw03420
Nucleotide excision repair
blw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
W7Y_1338
03430 Mismatch repair
W7Y_1338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blw03400
]
W7Y_1338
Enzymes [BR:
blw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
W7Y_1338
DNA repair and recombination proteins [BR:
blw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
W7Y_1338
MMR (mismatch excision repair)
Other MMR factors
W7Y_1338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AFJ17051
LinkDB
All DBs
Position
complement(1545594..1549730)
Genome browser
AA seq
1378 aa
AA seq
DB search
MAQSNKPVPSAEQQRIVDADANANVIVVAGAGSGKTFTMTERVIHLIHEGVPPEHILGLT
FTNKAASELLSRVSKAVLDDARERAREGGPHPARLAFMKPDVRTYDAFFQSIVRQYGLLV
GFDPQTQPLSVAGARQIIASVVGRHVDEIVQLPVDMGSFGTVVDAVGALANNIANSMIGN
GCLTVADAIERITQWDAAFRTQILDLLQTDETGLLTGPLADRQRGATPKAVKDVLKARKK
AEKKGGEYVETPGDKDAVGEAIHADAELAARDLYLVAMKRDVLLGLVREFDEEKRRRHMA
EYSDFVIAAYQLVERFPSIGAHYRRQFTHVLLDEFQDTSTTQSALLAALFHVDEPHGTDR
SAAVSAVGDPFQSIYAWRGASPGAFRMFINDFHMPAAAEPLPMTRTRRNSRVVLQGANNL
TKVLRRVEQRPSSANAQEVPVQPLRNVDDGSVEVDEGTLAVLGFQTRGQEVDAVTRFVKQ
SVEQYGDACKPGDSPVAVLFRGKKSMALYEDQLSQVTLRDGRPLRVRAVGLSAMLDRPEV
QDVLALLKVVGDHTDANALMRLLATPRYALGALDLKRLARRAADLNTEYRFRTLVEAGLA
PAGTPKREWGALVRQYARNAPNMVYLIDMLLRDDVEAQLEAAGLSDEGRAGVMQAVRAMH
RVQDEMYQPLAQVIHTAVEALNLDVDLMVASSLRTGGAPAPRDAVRAAIDALLETVNTYT
SEIAQQQRPTLRGFLTYLDMANGSDMPEAAADLGDEPADVVLMTVHQSKGLEWDAVAIVG
MQQGAFPSNKGDALRVKALEDRGSKLDWEPPLYEETAKSWLESPEAVPVPIRVDAAILPK
FPTIPDAGGSDASSLQESAVRALRDIDSVESLENDAYGELRALLRDNGVLLDELGEPDAW
NLSQKEERGRALHADERRLMYVALTRAKHDALVTYSVGATTSRIPEDNAKESGAPSVFWR
ELRDSMSCDDSFSQRVELTAFDNQTTAPARPVAATAGNTAVTYDDLESTQPRSLHERGAK
RPEGVIVGKGAEQFATLLVDEPYEEPMEPIDTEQHLPWPSRLSEEMHRTLRKGAAQVVQR
MSQNNPTDMPGETAEGDGRSLLERARQLIDNRATLIREGMTADEIEQAVRMRGQRVLAAK
DKLTATGLQRNAEAGENATDFALEIIRPVPQVSTPQAQAGTRFHAWAQRYLEAGVNPEYG
ISQEAMAREVAHEAEAVEQAERGGRPVPREQRDLLIWKQRFLESAWSAREPAAVEQTVST
FVSGIGKRVDAKLDAVFHGGLGDGTSGASGDARYTIIDWKTGSRPRNAQQRAGKLAQLDM
YRYFWALQKRIPMSQIDAALYYVSEKDPAKALVVAPQRSEAEVLAEMRAGVPEPDDND
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcaaacaagccggttccaagcgccgaacagcagcggatcgtcgatgccgat
gccaacgccaacgtgattgtggtggcgggtgccggctcgggcaagacgttcaccatgacc
gaacgcgtgatccacctgattcacgaaggcgtgcctccggagcatattctgggtctcact
ttcacgaacaaggccgcctccgagctgctttcgcgagtgtcgaaggcggtgctcgacgat
gcgcgtgaacgtgcgagggagggagggccccaccctgcacggctcgccttcatgaaaccc
gatgtgcgtacctacgatgcgttcttccagtcgatcgtgcgccaatacggattgctggtg
gggttcgacccgcagacgcagccgctgagcgtcgccggtgcacgccagatcatcgcctcg
gtggtgggccggcatgtcgacgagatcgtgcaactgccagtggacatgggctcgttcggc
acggtggtggatgccgtgggcgcactggcgaacaacatcgcgaattcgatgattggcaat
ggatgcctcaccgtggccgatgccatcgagcggataacgcaatgggacgcggcgttccgc
acgcagatcctcgacctcctgcaaaccgatgaaaccggcctgctcaccgggccgctggcg
gatcggcaaaggggtgccacgccaaaggcggtgaaggatgtgctcaaagccaggaaaaag
gcggagaagaagggcggagagtacgtcgagacccccggcgacaaggacgcagtcggtgaa
gcgatacatgccgacgccgagttggccgcgcgtgacctctacctggtggcgatgaaacgc
gatgtgctgctcgggctcgtgcgtgagttcgacgaggagaaacgccggcggcatatggcc
gaatacagcgacttcgtgatcgccgcctatcagctggtcgaacggttcccgtcgatcggc
gcccactaccggcgtcagttcacccatgtgctgctcgacgagttccaggatacatcgacg
acccaatccgcgttgctcgccgcattgttccatgtggacgaaccccatggcaccgaccgc
agcgcggccgtgagcgccgtgggcgacccgttccagtcgatctacgcatggcgtggggcc
tcgcccggtgcattccgcatgttcatcaacgattttcacatgccggccgccgcggagccg
ttgccgatgacgcgcacacggcgcaactcgcgggtggtgctgcagggggcgaacaacctc
accaaggtgctgcgccgcgtggaacagcgccccagcagcgccaacgcacaggaagtgccg
gtgcagccgctgcgcaatgtggacgacggcagcgtcgaggtggatgagggcaccttggcg
gtgcttggcttccagacccgcggacaggaggtcgacgccgtcacacgattcgtgaaacaa
tccgtggaacagtacggtgatgcctgcaagcccggtgattcgccggtggccgtgctgttt
cgcggcaagaagtcgatggccttgtatgaggatcagctgagccaggtgacattgcgcgac
ggcaggccgttgcgtgtgcgtgccgtgggtctttcagccatgctcgaccgaccggaagtc
caggatgtgctggccctgctcaaggtggtgggcgaccacaccgatgccaacgcgttgatg
cgcctgcttgccacaccacgctatgctctgggcgccctcgacctcaagcgtctggcccga
cgcgccgccgatctgaacaccgaataccgcttccgcacgctcgtggaggcggggctcgcc
cccgccggcacgccgaagcgcgaatggggcgcattggtgcggcaatacgccaggaatgcg
ccgaacatggtgtacctgatcgacatgctgttgcgcgacgatgtggaagcgcagctggaa
gccgccgggctgagcgatgaggggcgtgccggcgtgatgcaggccgtgcgggccatgcac
cgcgtgcaggacgagatgtaccagccgcttgcgcaggtgatccacaccgcggtggaggcg
ttgaacctcgacgtcgacctcatggtggcaagcagtctacgaacggggggagcgccggct
ccgcgcgatgcagtgcgtgcggcaatcgatgcgctgctcgagacggtgaacacctacacg
tcggagatcgcgcaacagcagcgtcctacattacgtgggttcctgacctacctcgacatg
gcgaatggcagcgatatgccggaggcagccgctgacctcggcgatgaacccgccgatgtg
gtgctcatgacggtgcatcaatcgaagggattggaatgggacgccgtggccatcgtaggc
atgcaacagggcgcattcccctcgaataagggtgacgcattgagggtgaaggcactggaa
gaccgcgggtcgaaactggattgggagccgccgctctacgaggagacggccaaaagctgg
ctggagagtccagaggcggtcccggtgccgattcgcgtggacgccgccattctgccgaag
ttccccacgattcccgatgcggggggatccgatgcgtcgagcctgcaggagagcgcggta
cgcgcattgcgtgacatcgattcggtggagagcctggagaacgacgcctacggtgaacta
cgcgcgttgctgcgcgacaatggtgtgctcctcgacgagctgggcgagcccgacgcgtgg
aacctgtcgcagaaagaggagcgtggtcgtgccctgcatgccgatgagcggcgcctcatg
tatgtggcgttgacccgcgccaagcacgatgcattggtcacctacagcgtgggcgccacg
acgagccgcataccggaagacaacgccaaggagtcgggcgccccctccgtgttctggcgg
gaattgcgcgattccatgtcatgcgacgactcgttctcccagcgtgtggaactgaccgcg
ttcgacaatcagaccaccgcgccggcccggccggttgccgccactgccggcaacaccgcc
gtgacctacgatgatctggagtccacgcagccgcgctcgctgcatgaacgcggcgccaag
agaccggagggcgtcatcgtcgggaagggggccgagcaatttgcgacgcttcttgtggac
gaaccctatgaggaacccatggagccgatcgatacggaacagcatctgccatggccaagt
cggctgagcgaagagatgcaccgcacactgcggaagggcgcggcacaggtggtgcagcgc
atgtcgcaaaacaatccgacagacatgccgggcgaaaccgcggaaggcgacggcagatcg
ctgctggagcgggcgcgccagctcatcgacaacagggcgacgctgatccgtgaaggcatg
acggccgacgagattgagcaggccgtgcgcatgcgcgggcagcgcgtgctggccgccaaa
gacaaactcacggccaccggtctgcagcgcaatgccgaggcaggcgagaacgccacggat
ttcgccttggagatcattcgccccgtgccgcaagtgagcacacctcaggcgcaggcgggc
acgagattccacgcctgggcacagcggtatctcgaagcgggggtgaacccggaatacggc
atctcgcaggaggccatggctcgcgaggtggcgcacgaggcggaagccgtcgaacaggcc
gagcggggaggtcgtccggtgcccagggagcaacgcgatctgctcatatggaaacagcgg
ttcctcgagtcggcatggtcggcacgtgaaccggccgccgtggagcagaccgtctccact
ttcgtcagcggcataggcaagcgcgtggatgccaagctcgacgccgtgttccatggcggt
cttggcgacggcacgtccggtgcgagtggggatgcgcggtatacgatcatcgactggaaa
accggctcgcggccacgcaatgcacagcagcgcgccggcaagctcgcccagctcgacatg
taccggtatttctgggcgctgcagaaacgcatcccgatgagtcagatcgatgccgccctc
tactacgtcagcgagaaggacccggcgaaagcgctcgtggtcgcgcctcaacggagcgag
gcggaggtgctcgccgagatgcgcgccggcgttcctgaacccgacgataacgattag
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