Bifidobacterium longum BXY01: GS08_04435
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Entry
GS08_04435 CDS
T03387
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blx
Bifidobacterium longum BXY01
Pathway
blx03420
Nucleotide excision repair
blx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GS08_04435
03430 Mismatch repair
GS08_04435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blx03400
]
GS08_04435
Enzymes [BR:
blx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GS08_04435
DNA repair and recombination proteins [BR:
blx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GS08_04435
MMR (mismatch excision repair)
Other MMR factors
GS08_04435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AIF90401
UniProt:
A0A7U4H5H8
LinkDB
All DBs
Position
1031355..1034048
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AA seq
897 aa
AA seq
DB search
MYDEPEVIARSAQELVGDLNPQQAEAVQYRGQALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQILAITFTNKAAAEMRERLGSLIGPVAQRMWVSTFHSACVRILRRDGKSIGLKSGF
SIYDSADSERLVKIIATEFNLDIKRYTPRSILGRISDLKNNLTGWKENLAVHAPDFTPGQ
RGYQFGTVDDLEAIYAVIYAEYEHRLALANAVDFDDLIGRTVELLRTDPAVAEYYHHRFR
YILVDEYQDTNHAQYVLVRELAGVDTGEKAIPGAPNAGKSGPAWITVVGDSDQSIYAFRG
ADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVISNNEGRKPKKLWTALGKGEPI
VGYAADNAQQEAQWVATEIARLHAEEGISYSDMAIMYRANAQSRSLEEALINTNQPYQLV
GGTKFYERREIKDALAYLQALVNPDDDVNLRRILNVPKRGLGDRAEGVLLAYAREHGTSF
FYALMHLDEIEVPTRTATSLRAFRDLMGALSQFTHAHDSKPSEIVAEVLEKSGLRAELEK
SVDPQDASRLENLSQLQSTAAEFEQNTPDATLSAFLETTALVADSDQLPGEAEDSGKVTL
MTLHTAKGLEYPVVFLTGMEQGTFPHSRSMEDTTELQEERRLAYVGITRAKQRLYVTRAA
VRSQWGQAADMMPSQFLDEIPDSLIDWKRREAGVERMRANWETDGFADDLGGWDDDDFGG
ATFGGSSTFGSRGSSGSGSSYGSRSRYGSSYGSGSGSSSYGSRSGSSYGSRSSSYDSRSG
SSSYGSRSRSGSSYGSRSRSGSSSGSYGGTRGGKVTTRRTTPKSGSTGSAVPSSKLTKDN
GLNIADFAVGDMISHDQYGLGKVTDAQDKGRNSVITVDFGSAGVKRLMLRVAPIEKL
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgacgagccggaagtcatcgcacgcagcgcgcaggaactcgtaggcgatctgaac
ccgcagcaggcggaagccgtgcaataccgcggtcaggcgctactgatcggtgccggtgcc
ggctccggcaaaacccgtgtgctgacccgccgcatcgcctggatcttgagccagttcggc
gcatggccgagccagattctggccatcaccttcaccaacaaggccgccgccgaaatgcgc
gaacgactcggctcgctgatcggcccggtggcccagcgcatgtgggtctccaccttccat
tccgcctgcgtgcgcattctgaggcgcgacggcaagtccatcgggctcaagtccggcttc
tccatttatgattccgccgactccgagcgactcgtcaaaatcatcgccaccgaattcaac
ctcgacatcaagcgctacactccacgctcgatcctcggccgtatctccgacctcaagaac
aatctgaccggttggaaggaaaacctcgccgttcacgcgcccgacttcacgcctggccag
cgcggctaccagttcggcacggtggacgaccttgaagccatctatgcggtgatctacgcc
gaatacgagcatcgcttggccctggccaacgccgtcgacttcgacgatctgatcggccgc
acggtcgagttgctgcgcaccgacccggccgtcgccgagtactaccatcaccgcttccgt
tacattctcgtcgacgagtatcaggacaccaaccacgcccagtacgtgcttgtgcgcgag
ctggccggcgtggacacgggggagaaggccatcccgggcgcgccgaacgccggcaagtcc
ggccccgcctggatcaccgtggtgggcgattccgaccagtccatctacgcgttccgtggc
gccgacatccgcaacatccaggacttcgagcaggacttcccgaacgccaagaccatcatg
ctcgaacagaactatcgttcgacgcagaccattctggacgcggccaacgcggtgatcagc
aacaacgagggccgcaagcccaagaaactgtggaccgcgctcggcaagggcgagccgatc
gtcggctacgcggcggacaacgcccagcaggaggcccagtgggtggccaccgaaatcgcg
cgcctgcacgccgaagagggcatctcctactccgacatggcgatcatgtaccgcgccaac
gcccaatcccgctcgctcgaagaggcgctgatcaacacgaatcagccgtatcagctcgtc
ggcggcaccaagttctacgaacgtcgcgaaatcaaggatgcgctggcctatttgcaggcg
ctcgtcaatccggacgacgatgtgaatctacgtcgtattctcaacgtgcccaagcgcggg
cttggcgaccgcgccgaaggcgtgctgctcgcctacgcgcgcgagcatggcaccagcttc
ttctacgcactcatgcacttggatgagatcgaggtgccgacccgcaccgccacctcgcta
cgagcattccgcgatctgatgggcgcgctctcgcagttcacgcacgcgcacgactccaag
cccagcgagatcgtggccgaagtattggagaagtcgggcttaagggccgaacttgagaaa
tccgtggatccgcaggacgcctcccgtctggagaacctctcccagctgcagtccaccgca
gccgaattcgaacagaacacgcctgacgccacgttgtccgcattcctggagaccaccgcg
ctcgtggccgactccgaccagctgcccggtgaggcggaggactccggcaaggtgacgctc
atgaccttgcacaccgccaagggcctcgaatacccggtggtgttcctgaccggcatggaa
cagggcaccttcccgcattcgcgttcgatggaagacaccactgaactgcaggaggaacgc
cgactcgcctatgtgggcatcacgcgtgccaagcagagactgtatgtcacgcgcgccgcc
gtccgctcccagtggggccaggccgccgatatgatgcccagccaattcctcgacgaaatt
ccggattcgctgattgattggaaacgccgtgaagccggcgtggagcgtatgcgcgccaac
tgggagaccgatggattcgccgacgatttgggcggctgggatgatgacgatttcggcggt
gccacgtttggcgggtcgtcgacgttcggctcgcgtggttcgtccggttcgggttcgtcc
tatgggtcgcggtcgcggtatgggtcgtcgtatggctcgggttccggctcctcgtcgtat
ggttcccgttcaggttcttcgtacggttcccgttcatcatcatatgattcccgctccggc
tcgtcctcctacgggtctcgctcccgttcggggtcgtcttacgggtcgcgttcccgttcc
ggttcttcatccggttcatatggcggcacccgtggcggcaaggtcaccacgcgccgcacc
acaccgaaatccggttcgaccggctctgccgtgcccagctcgaagctcaccaaggacaat
ggcctgaatatcgccgacttcgccgtgggcgacatgatcagccacgaccagtacggtctc
ggcaaggtcaccgacgcgcaagacaagggccgcaattcggtaatcaccgtggacttcggc
tccgccggcgtcaaacgcctcatgctccgcgtagcacctattgagaagttgtag
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