Bifidobacterium longum BXY01: GS08_06100
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Entry
GS08_06100 CDS
T03387
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
blx
Bifidobacterium longum BXY01
Pathway
blx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
blx00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GS08_06100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blx03021
]
GS08_06100
Transcription machinery [BR:
blx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GS08_06100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
AIF90691
UniProt:
A0A7U4H616
LinkDB
All DBs
Position
complement(1372265..1373689)
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AA seq
474 aa
AA seq
DB search
MATKETTATKQTAESSEETETKKKASSTTTARKTSAKKSKSAEPSKKTTRKSAAKKTAKK
AEDDELVKDEDTQVDDELDDDAEVNDDDLDVDDLGEDLDDVDEGDADDEDLDEDDADDDD
VEDDEDEEEAKSKAPEQPKEKGAYVVSDTDDEEENIIPSGNPKRRVIAAGATADPVKDYL
KQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTESEGMEFKRKRELKWAAADGKKAKDHL
LEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAI
TRAMADQARTIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQK
YGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVI
KMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttggccacgaaggaaacgacggcaaccaagcagacagccgagtccagcgaggagaccgag
accaagaagaaggccagctctacgaccaccgcgcgcaagacttctgccaagaagtccaag
tccgcagagccctcgaaaaagaccacgcgcaagtccgccgcgaagaaaaccgcgaagaag
gccgaggacgatgagctcgtcaaagacgaggacactcaggtcgatgacgagcttgatgac
gatgccgaggtcaacgacgacgatttggatgttgacgacctcggcgaggatcttgacgac
gttgacgaaggcgatgccgacgacgaagacctcgatgaggacgatgccgacgacgacgat
gtggaagacgacgaggacgaggaagaagccaagtccaaggcacccgagcagcccaaggaa
aagggtgcctacgtggtctccgacacggatgatgaggaagagaacatcatcccttcgggc
aatccgaagcgtcgtgtgatcgcggccggcgcaaccgccgacccggtcaaggactacctg
aagcagatcggccgtgtgagcctgctgaacgccgaacaggaagttgacctgtccgagcgc
atcgaggccggcctgtacgcccagcacctgctcgacaccgaaagtgaaggcatggagttc
aagcgcaagcgtgaactcaagtgggccgccgccgacggcaagaaggctaaggaccatctg
ctggaagccaacctgcgacttgtggtctcgctcgccaagcgttacacgggtcgtggcatg
ctcttccttgatttgatccaggaaggcaaccttggtctgattcgtgccgtcgagaagttc
gattggaagaagggcttcaagttctccacctacgccacgtggtggattcgtcaggccatc
acccgtgccatggctgatcaggcccgcaccattcgtgtgcctgtgcacatggttgaagtg
atcaacaagctgtcccgtgtacagcgccagatgctgcaggatctggggcgtgaacctacg
ccggacgagctggcccgcgagctggacatgccggttgagaaggtgcaggaagtgcagaag
tacggccgcgaaccgatttccctgcacaccccgcttggcgaggatggcgattccgagttc
ggcgacctcattgaggataccgacgccatcgctccgtccgacgccgtggccttctccctg
ctgcaggaacagttcaagcaggtgctggaaaccctgtctccgcgtgaggccggcgtcatc
aagatgcgctatggcctggaagacggccagccgaagacgctggacgacatcggccgtgtg
tatggcgtgacccgtgaacgcatccgtcagatcgagtccaagaccatgtccaagctgcgc
cacccgtcccgttcgcagaccctgcgcgacttcctggatcaatga
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