Bifidobacterium longum BXY01: GS08_06210
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Entry
GS08_06210 CDS
T03387
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
blx
Bifidobacterium longum BXY01
Brite
KEGG Orthology (KO) [BR:
blx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blx03016
]
GS08_06210
Enzymes [BR:
blx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GS08_06210
Transfer RNA biogenesis [BR:
blx03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
GS08_06210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
AIF90712
UniProt:
A0A7U4H639
LinkDB
All DBs
Position
complement(1396682..1398136)
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AA seq
484 aa
AA seq
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MNEDMMTEAERASIAADGTDSLLGERGKGVFHIHTLGCQMNVHDSERIAGVLEANGYVPA
TEGQINDNDLDLLVLNTCAVRENAAERMYGTIGRFNRVKLVRPNLQIAVGGCMAQLDRKK
IADTAPWVSAVFGTKNIEDLPKLLDQNRATGKAQVQVTEQLRQFPSQLPAARASRISSWV
AISVGCNNTCTFCIVPTTRGKEKDRRPGDILDEIRQCVADGAKEVTLLGQNVNSFGYGIG
DRYAFSKLLRACGTIDGLERVRFTSPHPAAFTDDVIAAMAETPNIMHQLHFPLQSGSDRI
LRAMRRSYRSAKFLDILGRIREAMPDAQISTDIIVGFPGETEEDFQQTMDVVRQARFSSA
FTFIYSPRPGTPAAAMEQIPRDVVQDRFDRLVALQEQITEENLATFEGRDVEVMITGKLG
KKDTDTHRVTGREKTGVLVHIGVPEGEPVPEIGDFVTVTVTHAGRHNLLADPDVAAEQTY
SVRH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagacatgatgaccgaggcggagcgtgcctcgattgcagccgatggaaccgat
agcttgctgggggagcgtggaaagggcgtattccatatccacacgctcggctgccagatg
aacgtgcacgattccgagcgcatcgccggcgtgctggaggccaatggctacgtgcctgca
accgagggccagatcaatgacaatgacctcgatctgctggtgctcaatacctgtgcggta
cgtgagaacgcagccgaacgcatgtatggtaccattggccgattcaatcgcgtcaaactg
gttcggccgaacctgcagatcgccgttggcggctgcatggcccagcttgaccgcaagaag
atcgcggatactgcgccatgggtttccgcggtgttcggtaccaagaacatcgaagatctg
cccaagctgttggatcagaatcgtgcgaccggcaaggcgcaggtccaggtcactgaacaa
ttgcggcagttcccgagccagcttcccgccgcccgcgcctcccgcatcagctcgtgggtg
gcgatttccgtgggctgcaataacacctgcacgttctgcattgtgcccaccacgcgaggc
aaggaaaaggaccgccgccccggtgacattcttgatgagatccgccaatgcgtggccgac
ggcgccaaggaagtcacgctcctcggccagaacgtgaactcgttcggctacggcatcggc
gatcgatacgctttcagcaagctgttgcgtgcctgtggcaccatcgacggtctcgaacgc
gtgcgcttcacttcgccgcacccggccgccttcaccgatgatgtgattgcagccatggcc
gaaacgccgaatatcatgcatcaactgcacttcccgctgcagtccggctccgatcggatt
ctacgcgcgatgcgccgctcctacaggtccgccaagttcctcgatatcttgggccgcatc
cgcgaggccatgcccgacgcacagatttccaccgatatcatcgtcggattccccggtgaa
accgaggaggacttccagcagaccatggacgtggtgcgccaggcgcgcttctcctcggcg
ttcacgttcatctactcgccacgccccggcacgccggccgccgcaatggaacagattccg
cgcgacgtggtgcaggaccggttcgaccgtctggtggcgttgcaggagcagatcaccgaa
gagaacctcgccacattcgagggccgcgacgtcgaagtgatgatcaccggcaaactcggc
aagaaggacaccgacacccaccgtgtcaccggccgcgagaaaaccggcgtgctggtgcac
atcggcgtgcctgaaggcgaaccggtacctgaaatcggcgatttcgtcacggtcaccgtc
acacacgctggccgccataatctgcttgccgaccccgatgtggccgctgaacagacctat
tccgtgcggcactga
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