Bifidobacterium longum BXY01: GS08_07150
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Entry
GS08_07150 CDS
T03387
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blx
Bifidobacterium longum BXY01
Pathway
blx03420
Nucleotide excision repair
blx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GS08_07150
03430 Mismatch repair
GS08_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blx03400
]
GS08_07150
Enzymes [BR:
blx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GS08_07150
DNA repair and recombination proteins [BR:
blx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GS08_07150
MMR (mismatch excision repair)
Other MMR factors
GS08_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIF90886
UniProt:
A0A7U4H6E5
LinkDB
All DBs
Position
complement(1627679..1629253)
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AA seq
524 aa
AA seq
DB search
MEQAQGILEGLDERQRTAATTLQGPVRIIAGAGAGKTRTVTRRIAYACATGAWKPERVLA
VTFSVKAAAEMRARLGQLGVGEGAGRSGSGAGTAGVTAATFHSAALHQLNSVWADICEAP
FPHVIEDQRDVVSRAIIRATARTDADPLTVRDVLAEINWAKISLVAVEDYARACAIAHRQ
PPAGLDTARFADVYSAYEQEKTSRGEIDFDDILLLVCHIMDDFPEAAAQIRSTIGWLTVD
EYQDVSPLQHRLLTLWLGGGGPDGKSAMNRNVCVVGDPAQTIYSFAGASSWDLLRFADEF
GPLAADVNLNTDYRSTPEVVNLANRVLAAAPNREDYLKLVSARESGPRVTRTAYESDMEE
AQGVAARIARLVANGAKPSDCAILTRINAQQPVFGAALRAARLKYRVRKDSGWQSSALAD
DAASKRALLEAMGLDATGLAANDDPGVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPET
GDALEEERRLMYVGITRAEDSLHLSYARTKDGYGAQHRRPSRFL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcgcaggggattcttgaggggctcgatgagcggcagcgtaccgccgcgact
acgttgcaagggccggtgcgcattatcgccggcgcaggtgccggtaaaacacgcacggtc
acgcggcggatcgcctatgcctgcgccaccggggcatggaagccggagcgggtgcttgcc
gtcaccttttcggtaaaagcggcggcggaaatgcgcgcacggttgggccagctcggcgta
ggggaaggtgccggacgttccggttcgggtgcgggaactgccggagtcacggccgcgacc
ttccactcagcggcattgcatcagctcaacagcgtctgggcggacatatgcgaggctcca
ttcccgcatgtgatcgaagatcagcgtgacgtcgtctcccgcgcgatcatccgcgccacc
gcacgtaccgatgccgatccgctgaccgttcgcgatgtgctcgccgaaatcaattgggcc
aaaatctcgttggtggcggtggaagactatgcccgggcctgtgccatcgcccatcggcag
ccgcccgccggacttgacaccgctcggttcgccgacgtctacagcgcctacgagcaggaa
aagacctcgcgtggcgaaatcgattttgacgatattctgctgctcgtatgccatatcatg
gatgattttcccgaagccgccgcccaaattcgttccaccatcggctggctcaccgtcgac
gagtatcaggacgtctcgcccctgcaacacaggctgctgaccctgtggctgggcggggga
gggcctgacggcaagagcgcgatgaaccgcaacgtatgcgtcgtgggcgatccggcccag
accatctactcgtttgccggtgcctccagctgggatctgctgcgtttcgccgatgaattc
gggccgctcgccgccgatgtcaatctcaacaccgactatcgttcgacgccggaagtcgtg
aatctcgccaaccgggtgcttgcggccgcgccgaaccgtgaggattacctgaaactggtt
tccgcccgcgaatccggcccgcgcgttacccgaaccgcttatgagagcgatatggaagag
gcgcagggcgtggcggcacgcatcgcccggttggtcgccaacggagccaagccgtccgat
tgcgcgattctcacccgcatcaacgcccaacagccggtattcggtgccgccttgcgcgct
gcgagactgaaataccgcgtccgcaaggattcgggatggcaatcatccgcgctcgccgac
gatgccgcgtccaaacgcgcactattggaggcgatgggtttggacgccaccggacttgcc
gcaaacgacgatcccggcgttacgatttccacgattcacgcatccaagggtctggaattc
aagcacgtgttcctgatcggctgttcggaagggctcttgccgtacggttcgccggaaacg
ggggatgcgctggaagaggaacgccggcttatgtatgtgggcatcacccgagctgaggat
tcgctgcatttgtcgtatgcgcggaccaaggatggttatggagcgcaacacagacgccca
tcacgatttttgtga
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