Bifidobacterium longum BXY01: GS08_07285
Help
Entry
GS08_07285 CDS
T03387
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
blx
Bifidobacterium longum BXY01
Pathway
blx00220
Arginine biosynthesis
blx00240
Pyrimidine metabolism
blx00250
Alanine, aspartate and glutamate metabolism
blx01100
Metabolic pathways
blx01110
Biosynthesis of secondary metabolites
blx01240
Biosynthesis of cofactors
Module
blx_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
blx00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GS08_07285 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GS08_07285 (carB)
00220 Arginine biosynthesis
GS08_07285 (carB)
Enzymes [BR:
blx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
GS08_07285 (carB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
GARS_A
ATPgrasp_Ter
ATP-grasp_2
ATP-grasp_5
UPF0261_C
Motif
Other DBs
NCBI-ProteinID:
AIF90913
UniProt:
A0A7U4H6G0
LinkDB
All DBs
Position
complement(1658410..1661793)
Genome browser
AA seq
1127 aa
AA seq
DB search
MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPIATPILEQIIAKERPDALLPTLGGQTALNAAMALGEAGVLKKYNVELIGASL
EAIDRGEDRELFKKVVDEAGAESARSDIAHSIEEVDKIAEKFGYPLVVRPSFTMGGLGSG
IAHNEEELHRIAGAGIHYSPTDEVLIEEGIEGWKEFELELMRDRNDNVVVVCPIENVDPV
GVHTGDSITVAPCFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAVHPATGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIRNDITQSTPASFEPTIDYVVTKVPR
FAFEKFPGADPTLTTSMKSVGEAMALAGNFQESLGKAMRSIDKRHMGFNWDGEKPSAEEV
AELLEAIHTPTEHRYLQLMRAIWGGATLEQVFAATKIDPWFLKQIFLINETAMTVREAET
LTPKLLKKAKLAGLSDVQVAHLRGLGDEGENTIRELRWTYGLRPVYKTVDTCAAEFDAAT
PYYYSCYADETELRPREREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYEAEKRMGPVKGIIVQLGGQTPLSLAARLKAAG
VPILGTTPESIDLAENRELFGEVLKKAEMNAPRYGTALSLEEAMDAAHRIGYPVLVRPSY
VLGGRGMEIVYDDKQLTKYVDRALAEAKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFD
GEELYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAIAKGCHVQGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIADQRANGLLLPKGDG
GDIHPGQQVAVKESVLPFKRFRTPVGKTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYDGGLPTHGNVFISVNDTDKRQLPLLAVRLEELGFKLWATEGTASVLRRYGIESNIVDK
ISTRVDTDPEAPVEVHHAAGSVGKNVVQLIEEGKIDMILNTPNSRGSRSDGYSIRAAAIA
ADLPQFTTITEFQAALLAIEAVKHNDYQIMSIQEHSKQLFELERQEF
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcaccgacatcaaatccgtgatggtcatcggctccggcccgatcgtgatc
ggtcaggctgcggagttcgattactcgggcacccaggcatgccgcgtccttcgtgaggaa
ggcatccgcgtcatcctcgtcaactccaacccggccaccatcatgaccgacccggagatg
gccgacgccacctacatcgagccgatcgccactccgatcctcgagcagatcatcgccaag
gaacgccccgacgcgcttctgcccaccctgggcggccagaccgcactcaacgccgccatg
gcgctgggcgaggccggcgtcctgaagaagtacaacgtcgaactgatcggtgcctccctg
gaagccatcgaccgtggcgaggaccgtgaactgttcaagaaggtcgttgacgaggccggc
gccgaatccgcccgctccgacatcgcccacagcatcgaggaagtcgacaagatcgccgag
aagttcggctacccgctggttgtgcgcccgagcttcaccatgggcggcctgggctccggc
atcgcccacaacgaggaggagctgcaccgcatcgccggcgccggcatccattactcgccc
accgacgaagtcctgatcgaagagggcatcgagggctggaaggaattcgagctcgagctc
atgcgcgaccgcaacgacaacgtcgtggtcgtctgcccgatcgagaacgtcgacccggtc
ggcgtgcacaccggtgactccatcaccgtggccccctgcttcaccctgaccgaccgcgaa
taccagaagctgcgtgacatcggcatcgccatcatccgcggcgtgggcgtggacaccggc
ggctgcaacatccagttcgccgtccacccggccaccggccgcatcatcgtcatcgagatg
aacccgcgcgtctcccgttcctccgcactggcctccaaggccaccggcttcccgatcgcc
aagatcgccaccaagctggccctcggctacacgctcgacgagattcgcaacgacatcacc
cagtccacgccggcctccttcgagccgaccatcgactacgtggtcaccaaggtgccgcgc
ttcgccttcgagaagttcccgggcgccgaccccaccctgaccacctccatgaagtccgtg
ggcgaggccatggccttggccggcaacttccaggagtccctcggcaaggccatgcgctcc
atcgacaagcgccacatgggcttcaactgggatggcgagaagccgtccgccgaggaagtg
gccgaactgcttgaggccatccacaccccgaccgaacaccgttacctgcagctcatgcgc
gccatctggggcggcgccacgctggagcaggtgttcgcggccaccaagatcgacccgtgg
ttcctgaagcagatcttcctcatcaacgagaccgccatgacggtgcgcgaggccgagacc
ctgaccccgaagctgctcaagaaggccaagctcgccggtctgtccgacgtgcaggtggcc
cacctgcgtggcttgggcgatgaaggcgagaacaccatccgcgagctgcgctggacctac
ggcctgcgcccggtctacaagaccgtcgacacctgcgccgccgagttcgacgccgccacg
ccgtactactacagctgctacgccgacgaaaccgagctgcgcccgcgcgagcgcgaggcc
gtgatcatcctcggctccggcccgaatcgcatcggccagggcatcgagttcgactacacg
tgcgtgcacgccgtgcaggagcttggcaaggactatgacaccatcatggtcaactgcaac
ccggagaccgtgtctactgattacgacatgtccgaccgcctctacttcgagccgctcacc
ttcgaggatgtgctcgaaatctacgaggccgagaagaggatgggcccggtcaagggcatc
atcgtccagctcggcggccagaccccgctgtccttggccgcgcgtctgaaggccgccggc
gtgccgattctcggcaccaccccggaatccatcgatctggccgagaaccgcgagctgttc
ggcgaggtgctcaagaaggcggagatgaacgccccgcgttacggcaccgccctgagcctc
gaagaggccatggacgctgcccaccgcatcggatacccggtgctcgtgcgcccgagctac
gtgcttggcggccgcggcatggaaatcgtctacgacgacaagcagctcaccaagtacgtg
gaccgcgcgcttgccgaggccaaggccgataccgtggtctccggccgcctgccctccccg
ctgctcatcgacaagttcctgcaagacgccatcgaaatcgacgtcgacgcactgttcgac
ggcgaggaactgtacatcggcggcattatggagcacgtcgaggaggccggcgtccactcc
ggtgacgccgcctgcaccctgcccccgtccaccctgtccgacgaccagatccgccgcctg
cgcgaaggcacctacgccatcgccaagggctgccacgtgcagggcctgatcaacgtgcag
tacgccttcatggccaacacgctgtatgtgatcgaagccaacccgcgtgcctcccgtacc
gtgccgttcgcctccaaggccaccggcgtggcactggccaaggccgccgcccgcatcatg
gccggcgagaccatcgccgaccagcgcgccaacggtctgctgctgcccaagggcgacggc
ggcgacatccaccccggccagcaggtcgcggtcaaggaatccgtgctgccgttcaagcgc
ttccgcaccccggtgggcaagaccgtcgacatcctgctcggacctgagatgcgctccacc
ggcgaggtcatgggcttcgaccgcgacttcccgcacgccttcgccaagagccagctcgcc
gcctacgacggtggcctgccgacccacggcaacgtgttcatctccgtgaacgacaccgac
aagcgtcagctgccgctgctcgccgtgcgcctcgaagagcttggattcaagctctgggcc
accgagggcaccgcctccgtgcttcgccgttacggcatcgagtcgaacatcgtggacaag
atcagcacccgcgtggacaccgatccggaagccccggtcgaggtgcatcacgccgccggc
tccgtgggcaagaacgtggttcagctcattgaggaaggcaagatcgacatgatcctcaac
acgccgaactcgcgcggctcccggtccgacgggtattccatccgcgccgccgccattgca
gccgatctgccgcagtttaccaccatcaccgagttccaagccgcactgctggctatcgag
gccgtgaagcataatgattatcagatcatgagcattcaggagcattcgaagcagctgttc
gaattggagcgacaggagttctga
DBGET
integrated database retrieval system
