Bifidobacterium longum BXY01: GS08_08035
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Entry
GS08_08035 CDS
T03387
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
blx
Bifidobacterium longum BXY01
Pathway
blx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GS08_08035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blx03400
]
GS08_08035
Enzymes [BR:
blx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GS08_08035
DNA repair and recombination proteins [BR:
blx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GS08_08035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
AIF91054
UniProt:
A0A7U4KEM3
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All DBs
Position
1856354..1857718
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AA seq
454 aa
AA seq
DB search
MGYPSTGRPPTAASLASAGFEPGQGTFAPDQGTINLPNEPRPIDQLPARAAETSAQNPWP
VSVLSQKFYGAVERWPSAWVTGQITQINTRRAGSAYITLRDDFEDIAMEVNGFGRFAAAA
SQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLKAMIDELRKQLKGEGLFDAD
HKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPAEVVQAIA
QLDADPSVDVIIVARGGGSFEDLIGFSDERVVRAAYACTTPLISSIGHEDDWTLLDLVAD
LRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRVRSRVENEIRLIEGYANRPSLTQPHT
MLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAHASLTALSPQSTLNRGYAVVQSSDGH
VLDDASRVSTGDDITVTLKKGVITATATSATATA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgggctacccatctaccggccgtccaccgaccgccgcttcactggcctcggctggcttt
gagccgggtcaaggcactttcgcgcctgatcagggcaccatcaatctgccgaatgagcct
cgccctatcgatcagctgcctgcacgcgccgctgaaaccagcgcgcaaaatccgtggccg
gtaagtgtgctgagccagaagttctacggtgccgtggaacgatggccgtccgcgtgggtc
accggccagatcacgcagatcaatacccgtcgcgccggctcggcctacatcacgctgcgc
gacgacttcgaggatatcgccatggaagtcaatggcttcggcaggttcgcggccgcggcc
agccagttcgttcagggcgaccgcgtggtgattcatggcaaaccgaacctgtggatgaag
cgcacttcgctgtcgttgcgcggggacacgattctcaaggtcggagccggtggcagcctc
aaggccatgatcgacgaattgcgcaagcagcttaagggcgagggcctgttcgatgccgat
cacaaactgcctctcccggagtttccgaagactattggcctgatttgcgcacctcaggca
cgtgcggaaggcgatgtgatcaccaatgtgaaccttcgttggccttccgtaaccttcaag
gtggtccatgtgcatgttcagggcgagcaatgcccggccgaagtggttcaggccattgca
caactcgatgccgacccgagcgtggatgtgatcatcgtggcccgtggcggcggctcgttt
gaggatctcatcggtttctcggatgagcgtgtggttcgtgcggcgtatgcctgcaccaca
ccattaatctcctccatcgggcatgaggatgactggacgttgctggatctggtcgccgat
cttagagcctccacccccaccgatgcggccaagcgcgtggtgccggatgtgcgtgagcag
tcgcagctcatcgaaggtgccatcgaccgtatgcgactgcgggtccgttcgcgcgtggag
aacgagattcgacttatcgagggatatgcgaaccggccaagcctgacccaaccgcatacc
atgctcgaaccgcatcagcggctgatcgacgattccctgcagcggcttgacatcggcctg
cggcgtatcgtggacgatgcccagctcaccgtcgagcgagctcacgcctcactgaccgca
ctcagcccgcaatccacgctgaaccgaggctatgcggtggtgcagtcctccgatggccat
gtgctggatgacgcttcgcgggtcagtaccggggatgacatcaccgtcaccctgaaaaag
ggcgtcattaccgccaccgccacatccgcaaccgcaaccgcgtaa
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