Bifidobacterium longum BXY01: GS08_08900
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Entry
GS08_08900 CDS
T03387
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
blx
Bifidobacterium longum BXY01
Brite
KEGG Orthology (KO) [BR:
blx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blx03016
]
GS08_08900
Enzymes [BR:
blx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GS08_08900
Transfer RNA biogenesis [BR:
blx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GS08_08900
Prokaryotic type
GS08_08900
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
SAMD1_SHD
Motif
Other DBs
NCBI-ProteinID:
AIF91207
UniProt:
A0A7U4H705
LinkDB
All DBs
Position
complement(2051107..2052270)
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AA seq
387 aa
AA seq
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MLHTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRL
LNAIMAHDKTYEATIRLGLRTTTDDAEGEVLVDDEARSRWQTLSAQLTEGGQSGEPTALP
TASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKEVELKPRPVTISEFT
VLNIRSGFVAGEQAAEPLREDANTGTIPALDIDVRVSCSSGTYIRALARDLGNELGVGGY
LTRLRRTRVGRFALPDDTSGLIASEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLN
TPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERAISESTAAIV
PQTHDVAAIIERANAHQAKPVTVFPLA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcatacaacacccagcggcctactcatcatcgacaagccgcaaggcgtgaccagt
ttcgacgccgtcgccgccgtgcgcggcgcgttgcacatcaagaaggtcggtcacgccggc
acccttgaccccatggccactggcacgctggtcatcgccttcggccacgccacgcgactg
ctcaacgccatcatggcgcatgacaaaacctacgaggccaccatacgcctcggcctgcgc
accactaccgacgatgccgaaggtgaggtgcttgtcgatgatgaagcccgctcccgctgg
caaacgctgtcagcgcagctgaccgagggtggccagagcggcgaaccaacggcgctacca
actgcctcatggcaagatctgctcactcgcaccatcgccaccaatttcaccggcgatata
gaacaagttcccaatacgttctccgccatcaaaatcaacggccagcgtgcctacgacttg
gctcgcgaaggcaaggaggtggaactcaaacctcgcccggtgaccatcagcgaattcacc
gtgctgaatatccgcagcggattcgtagcaggggagcaggccgctgaaccattgcgggaa
gacgcgaacacgggaacgattcccgcacttgatattgacgtgcgggtcagctgttcatcg
ggcacctatatccgcgcgctcgcccgcgacctcggcaatgaacttggcgtcggcggatac
ctgacccgtttgcgccgtacgcgagtcggccgattcgcgttgccggacgataccagcgga
cttatcgcctctgaggcgatgcttgacacgcgaacccataccgtcaccgcacataccgat
cagaagacgttcactaatcgggaagggcaaaccgtcacgcgcaacaagtgcgtattgaac
actcctgaaggtcttgccggtgacgagcgccgcaactggctgcttgaccatgccctcacc
atggaacaggccgctcgaggcgcgatgccggcgcttgacatcacacctgaggaagccagc
gaattacgcttcggccgccgtatcgagcgtgcgatcagcgagtccactgccgccattgtg
ccgcaaacgcatgatgtggcggcgattatcgagcgtgccaacgctcatcaggccaagccg
gtcaccgtattccccctcgcgtaa
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