Brevibacterium linens BS258: A2T55_06495
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Entry
A2T55_06495 CDS
T04319
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
bly
Brevibacterium linens BS258
Brite
KEGG Orthology (KO) [BR:
bly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bly03019
]
A2T55_06495
Enzymes [BR:
bly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A2T55_06495
Messenger RNA biogenesis [BR:
bly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A2T55_06495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
NTPase_1
SLFN-g3_helicase
ResIII
NACHT
T2SSE
V_ATPase_prox
PhoH
HA2_N
AAA_30
PET
ABC_tran
TsaE
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AMT95365
UniProt:
A0A144MRQ6
LinkDB
All DBs
Position
1463415..1467485
Genome browser
AA seq
1356 aa
AA seq
DB search
MAAARAAHPVTVSYPEDLPVTAAKDEIAEAIRDNQVVIIAGETGSGKTTQLPKICLDLGL
GVNGLIGHTQPRRIAARTVAERIADELDEELGNTIGYQVRFTAQVADSTRVKVMTDGILL
SELSRDKLLRDYEVIIIDEAHERSLNIDFLLGYLREVLDRRPDLKVIITSATIDPESFSA
HFGDAPIISVEGRTFPVEVRYRPLGDDPDDDDVDGPGESGNYETGVEEQTDGIISAVDEL
AAEAPGDILVFLSGEREIRDTADALNDHLRRRPRMSNWEVVPLFARLSAGEQQKVFKPHS
RPRIVLATNVAETSLTVPGIKYVIDVGTARISRYSNRTRVQRLPIERISQASANQRKGRS
GRTSEGICIRLYSQEDFESRPEFTDPEILRTNLASVILQMASLGFASSDQEILDFPFLTP
PEARAVRDGRTMLTELGALTSDSAGKIHVTETGRKLTVLPIDPRLARMVIAGAEAGCGGE
VTVIVAALSIQDPRERPAEVRAAADAKHARFTHRGSDFLSYLNLWNYLQSLQADMGSSKF
RRRCKEEFLNFVRIREWQDLVGQLRSLLGSAGIRIEKSVWQPSDDGSADEAGLGGEPGKA
TGAGRGSDQTQRGRGANGKIGFAELSAAKRSAKKQGATGPAGDTGKQVAAAKLDPHAAAI
HRSLLTGLLTMIGSRSERHKDYQGARGTRFAIFPGSGLFKVNPDFVMAAELVETSRLWAR
TVAAIDPDWVVEAAGDLVTRQHSDPHWSTKAGASMVYEKISLYGVTLVSDRRVGYGQIDA
EAARDAFIRKGLIEGDWHERFGFLDHNAAVIEEAEDLASRTRNRRVLDQDDALFEFFDER
IPEGITSAADFRGWWKKQKRRDAHLLDLTTSVLLSDDSEELTASVASDFPMEWELSDGTL
AKLRYSFDPGSTEDGVTVEIPAEAVPAVDADEFSWQVPGLREELVAAYIRSLPKNKRRYF
VPAPDVAREILPALTPYHGSLPDVLAAYLSERAGGGGLNDLVPITVTADDFDRSRIPAHL
RLTFRVVDGKKTVGLGEDLTALTTKAKPQVRKARQKQSSFNPQTGLTDWSFGELADPDQA
PAGVVPGLADRTTSVDLVAFDTAAQARLATREAIITLLGQHTGDALKYLQDGLTTQEKLV
LAGHQKTADELLVGLIRVGIRGLVADRLGPAETSWVSTADEFALLRKHVDAELPLACSSL
LPSLMKALTAATELDKLVSKASSLSILSNLADVQAWSASRTSAAAIAAMTPQMVRELPRW
VRAEVVRIGGMQDSPIRDKQLMDRVTGCGNDVLKKIGNRFPALAKTEWSQLIVSLPDAWV
EVVLMVEELRVSLFANSLGTAHPVSEKRIAKALAQL
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
ctggcagcggctcgagcggcccatccggtcactgtctcctaccccgaggatctgccggtc
accgccgcgaaggacgagatcgcagaggcgatccgggacaaccaggtcgtcatcatcgcc
ggtgagacgggatcgggaaagaccacccagctgccgaagatctgcctcgacctgggcctc
ggggtcaacggcctcatcggccacacccagcctcggcggatcgccgcgcggaccgtggcc
gagcgcatcgccgacgaactcgacgaagagctcggcaacaccatcggctaccaggtgcgg
ttcaccgctcaggtcgccgactccacccgcgtgaaggtgatgaccgacggcatcctgctg
tccgaactctcgcgcgacaaactgctgcgcgactacgaagtcatcatcatcgacgaggcg
cacgaacgcagcctcaatatcgacttcctcctcggctatctcagggaagtcctcgaccgg
cgtcccgacctcaaggtcatcatcacctcggcgacgatcgaccccgaatcgttttctgcc
catttcggtgatgctccgatcatctccgtcgagggccgtacctttccggttgaggtccgc
taccggccgctcggggatgatcccgacgatgacgatgtcgacgggcccggcgaatccggg
aactacgaaaccggagtcgaggagcagaccgacggaatcatctcggccgtcgacgaactc
gccgccgaggctcccggtgacatcctcgtcttcctctctggggaacgcgagatccgggat
accgccgacgcgctgaacgaccacctgcgcagacggccgcggatgagcaattgggaagtc
gtgccgttgttcgcccgactctcggcgggggagcagcagaaggtcttcaaacctcactca
cgcccccgcatcgtcttagccacgaacgtcgccgagacctcgctgacggtgcccggaatc
aaatacgtcatcgacgtcggcaccgcccgtatctcccgctactccaaccgcacccgggtt
cagcgtctgccgatcgagcggatctcccaagccagcgcgaaccagcgcaagggccgctcg
ggacgcaccagtgaaggcatctgcatccggctgtactcgcaggaagacttcgaatcacgc
cccgaattcaccgatccggagatcctgcgcacgaacctcgccagcgtcatcctgcagatg
gcctcactgggattcgcgtcgagcgaccaggagatcctcgacttcccgttcctcaccccg
ccggaggccagggccgtccgtgacggacgcacgatgctcaccgagcttggggcgttgacc
agcgattctgccgggaagatccacgtcactgagaccggtcggaaactcaccgtgctgccg
atcgatcctcgcctggcccgaatggtcatcgccggagcggaggccggctgcgggggagag
gtcaccgtcatcgtcgccgcactgtcgatccaggatcccagggaacggccggccgaggtc
cgagccgccgccgatgcgaaacatgcccggttcactcaccggggcagtgacttcctgtcc
tacctcaacctgtggaactacctgcagagcctgcaggccgacatgggatcctcgaaattc
cgtcggcggtgcaaggaagagttcctcaatttcgtgcgcatccgcgaatggcaggatctc
gtcggtcagctgcgctcgctgctcggctccgcaggcatccgaatcgagaagtcggtctgg
cagccgtccgacgacggaagcgccgatgaggctggtctcggtggtgaacctgggaaggcg
accggggccggacgcggttccgaccaaactcagcgcggacgcggtgcgaacggcaagatc
ggattcgccgaactcagcgccgccaaacgcagcgcgaagaagcagggtgcgaccggtccg
gcaggtgacaccgggaaacaggtcgccgcggccaaactcgacccgcacgcggccgccatc
caccgttcgctgctcaccggactgctgacgatgatcggctcacgttcggagaggcacaag
gactatcagggggcccgcggcacacgcttcgcgatcttccccggctccggactcttcaag
gtcaatcccgacttcgtcatggccgccgagctcgtcgagacctctcgcctgtgggcacgg
accgtggccgcgatcgacccggactgggtcgtcgaagcagccggtgatctggtcacccgc
caacattcggacccgcactggtcgacgaaggccggcgcttcgatggtgtacgagaagatc
tccctctacggcgtcaccctcgtcagcgaccgccgcgtcggatacggacagatcgacgca
gaagccgctcgcgacgcattcatccgcaagggtctcatcgaaggcgactggcacgaacgc
ttcggcttcctcgaccacaacgcggccgtcatcgaggaggccgaagatctggcctcacgg
acgcggaaccgtcgcgtgctcgaccaagacgatgccctgtttgaattcttcgatgagcgg
attccggaagggatcacctcggcggcggatttccggggttggtggaagaagcagaagcga
cgggacgcgcatctgctcgacctcaccacctcggtgctgctcagcgacgacagtgaggaa
ctgaccgcctcggtggcctcggacttcccgatggaatgggaactgagcgatggaaccttg
gcgaagctgcgctattccttcgaccccggcagcaccgaggatggggtgaccgtggagatc
cccgccgaggcggtgcccgcggtcgacgcggacgagttcagctggcaggtccccgggctg
cgcgaagaactcgtcgccgcctatattcggtcgctgccgaagaacaaacgccgctacttc
gttcccgcacccgacgtcgcccgcgaaatcctgcccgccctcaccccgtaccacgggagc
ctgccggacgtgctcgccgcgtacctgagcgaacgcgccggcgggggagggctcaacgac
ctcgtgccgatcacggtcaccgccgatgacttcgatcggtcgcggattcccgcccacctg
cgtctgaccttccgggtcgtcgacgggaagaagaccgtcggcctcggcgaggacctgacc
gcgctgacgacgaaggccaaaccgcaggtgcgcaaggcccgacagaagcagagctcgttc
aacccgcagaccggtctgactgactggtcattcggcgaactggccgaccccgatcaggct
ccggccggtgttgttccggggcttgcggaccgtacgacgtcggtcgacctcgtcgccttc
gacaccgcagcgcaagcacgactggccacgcgcgaagcgatcatcacactgctgggccag
cacactggtgacgcactgaagtacctgcaggatggtctgaccacccaggagaaactcgtc
ctcgccggtcatcagaagaccgccgacgagctgctcgtcgggctgatccgggtcgggatc
cgaggactcgtcgccgaccggctgggaccggccgaaacgtcgtgggtgtccaccgccgat
gagttcgcgctgctgcgcaagcacgtcgacgccgagctgccgctggcgtgctcgtcactg
ctgccgtccctgatgaaagccctgacggcggcgaccgagctcgacaagctcgtgtcgaag
gcctcctcgttgtcgatcctgtccaacctcgccgatgtgcaggcctggagcgcttctcgg
acgagcgcagccgccattgcggcgatgactccgcagatggtgcgcgagctgcctcgctgg
gtgcgcgccgaagtggtgcgcatcggcgggatgcaggattcgccgatccgcgacaagcag
ctcatggatcgggtcaccggctgcggcaatgatgtgctgaagaagatcggcaatcgcttc
ccggcgctggcgaagaccgagtggtcgcagctcatcgtgtcgctgccggacgcgtgggtc
gaggtcgtcctgatggtcgaagagctgcgagtctcactgttcgcgaattcgctgggcacc
gcgcatccggtgtcggagaagcgcatcgcgaaggctctcgcccagctctga
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