Brevibacterium linens BS258: A2T55_07990
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Entry
A2T55_07990 CDS
T04319
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bly
Brevibacterium linens BS258
Pathway
bly03420
Nucleotide excision repair
bly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A2T55_07990
03430 Mismatch repair
A2T55_07990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bly03400
]
A2T55_07990
Enzymes [BR:
bly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A2T55_07990
DNA repair and recombination proteins [BR:
bly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A2T55_07990
MMR (mismatch excision repair)
Other MMR factors
A2T55_07990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMT95405
UniProt:
A0A144MSZ8
LinkDB
All DBs
Position
1796389..1799568
Genome browser
AA seq
1059 aa
AA seq
DB search
MRFTAERLAELTAADPAQAFPPSPEQKVIIEADPAQSMKVTAGAGSGKTTVISQRVVWLV
ANEYVSPEEILGLTFTRKAVGELGGRIRVLLSRLRHNLGRGQDLSLPGLDNPTVSTYNSY
AASIVSEHGVSIGIEPETVLLDDAAAHTLAGNLIDSTPSEEIPGDFSRETMIADIIALAG
QMNDHGRDVEEVTDYLEQCLAALVSSKGKPVDPNGRRAKLEAKIRTARLADAYMRAKRRN
LAMDFSDQVRFAQRILDEVPAAAEAERARWKIVLLDEFQDTSVAQLKLLRDLFHSTAVTA
VGDPRQAIYGWRGASADNMVRFSSDFRDVESLSLSTSWRNDRSILQVANRIASGLADSNE
SPLSARDGAGDGEVNVEISSGAHDPDFLTTGLRALTEWFHTVPEGSSKAVLCRKRAHFAP
VAAALEAAGFAVHVHGSSGLLTDPFVADLRAVLTAAVDPMAGDEIMRLISGRMLGLGAGD
IAGLQAFTRRQTERRASDRAEPTAEEVIVEAIDQATIVEGIDELIEVQRALDQGARTSAD
KGLVADYQQSGLSSEALHRLVRLARALRTTRSGTGTITSIIRTAMSETGIDSDIWGLSDS
LRNLHRSSVDAFLSAASQYSATDDKPSITGFLSWLSLMEAHDALSVAEPTTAADAINIMT
VHASKGLEFDAVAVPSLVVKDFPTEPRDKEGWMDRTALPYPLRGDRAHLVDFDLREAEFD
TKKALDEWIGDFIRPKIADAHEGEERRLAYVAFTRAKRHLWLGAELMGSRATPDDPSPFL
TEAIEALGLEVDVPEPADESAEDRIETTLWPVPRTRQVAAAQRAAGWVEASPDVSLESLA
EESGVIGRFAAQALRIVDRPETTSAATMPDRLSATALVAWRRDPQGFRTQTLRPIPTPPS
RAAEIGTTFHSWVEQHFGQSSIDIGDDESVRPIDAATIERLQATFSASDFATRRADHVEM
SFELVLGRFRVPGKIDAVFITGDHAEVVDWKTSKKPDDAVLEVMKWQLALYRFAILRVHP
EITEVTGTFYFVGSDEVVQFTDLPDEDEVIAWLEANDVG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcactgccgagcggcttgccgagctcacagccgccgatcctgcccaggccttc
ccgcccagcccggagcagaaggtgatcatcgaggccgaccccgcacagtcgatgaaagtc
accgccggggccggctccggaaagaccaccgtcatctcgcagagagtggtgtggctggtc
gcaaacgagtacgtgtctcccgaagagatcctcggcctgaccttcactcgaaaagccgtc
ggagaactcggtggacgcatccgagtgcttctgtcccgtctgcggcacaacctcggacgc
ggccaggacctgtccctgcccggtctcgacaatccgaccgtgtccacgtacaactcctat
gccgcatctattgtcagcgaacacggggtgagcatcggcatcgagcccgaaacggtactg
ctcgatgacgccgcagctcacaccctcgcagggaatctcatcgattccacaccatccgaa
gagatccccggagacttctcccgcgagacgatgatcgccgacatcatcgctttggccggg
cagatgaatgatcacggtcgggatgtcgaggaggtcacggactatctcgagcagtgcctg
gccgcgctggtgtccagcaaaggcaaacccgtcgatcccaacggacggcgggctaagctc
gaagcgaagatccgcacggctcgactggctgatgcctatatgcgcgcgaaacgacgcaac
ctggccatggacttctccgaccaggtgcgcttcgcccaacgcatcctcgacgaagtgccc
gctgccgcagaggccgagagggcacggtggaagatcgtcctcctcgacgagttccaggac
acgtcggtggctcagctgaagctgttgcgtgacctcttccactccactgccgtcaccgcc
gtcggcgatcctcgccaggccatctacggttggcgcggtgccagcgctgacaacatggtg
cggttctcctctgatttccgcgatgtcgaatccctgtcgctgagcacaagttggcgcaat
gaccgttcgatcctgcaggtggccaatcgcatcgcctccggactcgctgacagcaatgag
tccccgctgtcggctcgcgacggtgccggagacggcgaagtcaacgtggagatcagctcc
ggtgcccacgaccccgatttcctcaccactggtctgcgcgcactcacggaatggttccac
actgtcccggaaggttcgtcgaaagcggtgctgtgccgcaagcgagcccatttcgcaccg
gtggcggcggccctggaagccgccgggttcgccgttcatgtgcacggttcctccgggctg
ctgaccgaccccttcgtcgccgatctgcgcgcagtgctcaccgccgcggtcgatccgatg
gctggcgacgaaatcatgaggctcatcagcggacggatgctcggcctcggtgcgggcgat
atagcaggactgcaggctttcacccgtcgtcagaccgagaggcgagcctccgatagggcc
gagccgaccgccgaggaagtcatcgtcgaagccatcgaccaggcgacgatcgtcgaaggc
atcgatgaactcatcgaggtccagcgtgcgctcgaccagggagcgcggacgagtgcggac
aagggacttgtcgccgactatcaacagtccggcctgagttcggaggcgctgcatcgtctg
gtccgattggctcgcgcgctgcggactacccgatcgggtacgggcacaatcacgtcgatc
atccgcaccgcgatgtccgagactggaatcgattcggacatctggggcctcagcgattcc
ctgcgcaatctgcacagaagctccgtcgacgcgttcctgtccgcggccagccaatactcg
gctactgacgacaaaccctcgatcacaggcttcctgtcctggctcagtctcatggaagcc
catgatgcgctgagcgtcgccgaaccgacgacggcagccgatgcgatcaacatcatgacc
gttcacgcctcgaaggggctggaattcgacgccgtcgccgttccctccctggtggtcaag
gacttcccgaccgagccgcgggacaaggaagggtggatggaccgcaccgccctgccgtac
ccgctgcgcggtgaccgcgctcatctcgtcgacttcgacctgcgggaagccgaattcgat
acgaagaaggccctggacgagtggatcggagacttcatccgcccgaagatcgccgacgca
catgagggggaggaacggcgactggcctatgtggcattcacccgcgccaagaggcatctg
tggctcggagcggaactgatgggttcgcgcgccactcccgacgatccctcgcccttcctc
accgaagcgatcgaagccttggggctggaggtggacgttccggaaccggccgacgaatcg
gctgaggaccggatcgagaccactctatggccggtgccgcgtacgaggcaggtcgccgcg
gcccaacgtgccgcaggatgggtcgaagcgagcccggatgtcagcttggagtccttggcc
gaggaatcgggggtgatcgggcgcttcgccgctcaggcactgcgtatcgtcgaccgcccc
gaaaccacgtccgcggcgacgatgcccgaccgcctgtcggcgacagcattggtcgcatgg
cgaagggacccgcagggattccgtacacagactctgcgtccgatcccgactccgccgagc
cgtgctgccgagatcggaacgaccttccattcctgggtggaacagcatttcggtcagtcg
agcattgacatcggcgacgacgaatcggtgcgaccgatcgacgccgcgacgatcgaacgg
ctgcaggcgacgttctcagcttccgatttcgcgacgcgacgggccgaccatgtggagatg
tcgttcgagctcgtcctgggcaggttccgggtgccggggaagatcgatgctgtcttcatc
actggggaccatgccgaggtcgtggattggaagacgtcgaagaaacccgacgacgcagtg
ctcgaggtgatgaaatggcagctggcgctctaccggttcgcgatcctgcgcgtgcatccg
gagatcaccgaggtgaccgggacgttctacttcgtcggcagtgatgaggtcgtgcagttc
accgatctgcccgacgaggacgaagtcatcgcttggttggaagccaacgacgtcggctga
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integrated database retrieval system
