Bifidobacterium longum subsp. longum GT15: BLGT_07260
Help
Entry
BLGT_07260 CDS
T03452
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blz
Bifidobacterium longum subsp. longum GT15
Pathway
blz03420
Nucleotide excision repair
blz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLGT_07260
03430 Mismatch repair
BLGT_07260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blz03400
]
BLGT_07260
Enzymes [BR:
blz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLGT_07260
DNA repair and recombination proteins [BR:
blz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLGT_07260
MMR (mismatch excision repair)
Other MMR factors
BLGT_07260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIW44830
LinkDB
All DBs
Position
complement(1681912..1683486)
Genome browser
AA seq
524 aa
AA seq
DB search
MEQAQGILEGLDERQRTAATTLQGPVRIIAGAGAGKTRTVTRRIAYACATGAWKPERVLA
VTFSVKAAAEMRARLGQLGVGGGTERSGLGAGTAGVTAATFHSAALHQLNSVWADICEAP
FPHVIEDQRDVVSRAIIRATARTDADPLTVRDVLAEINWAKISLVAVEDYARACAIAHRQ
PPAGLDTARFADVYSAYEQEKTSRGEIDFDDILLLVCHIMDGFPEAAAQIRSTIGWLTVD
EYQDVSPLQHRLLTLWLGGGGPDGKSAMNRNVCVVGDPAQTIYSFAGASSWDLLRFADEF
GPLAADVNLNTDYRSTPEVVNLANRVLAAAPNREDYLKLVSARESGPRVTRTAYESDMEE
AQGVAARIARLVANGAKPSDCAILTRINAQQPVFGAALRAARLKYRVRKDSGWQSSALAD
DAASKRALLEAMGLDATGLAANDDLGVTISTIHASKGLEFKHVFLIGCSEGLLPYGSPET
GDALEEERRLMYVGITRAEDSLHLSYARTKDGYGAQRRRPSRFL
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggcgcaggggattcttgaggggctcgatgagcggcagcgtaccgccgcgact
acgttgcaagggccggtgcgcattatcgccggcgcaggtgccggtaaaacacgcacggtc
acgcggcgaatcgcctatgcctgcgccaccggggcatggaagccggagcgggtgcttgcc
gtcaccttttcggtaaaagcggcggcggaaatgcgcgcacgattgggccagctcggcgta
gggggaggtactgaacgttccggtttgggtgcgggaactgccggagtcacggccgcgacc
ttccactcagcggcattgcatcagctcaacagcgtctgggcagacatatgcgaggctcca
tttccgcatgtgatcgaagatcagcgtgacgtcgtctcccgcgcgatcatccgcgccacc
gcacgtaccgatgccgatccgctgaccgttcgcgatgtgctcgccgaaatcaattgggcc
aaaatctcgttggtggcggtggaagattatgcccgggcatgtgccatcgcccataggcag
ccgcccgccggactcgacaccgctcggttcgccgacgtctacagcgcctacgagcaggaa
aagacctcgcgtggcgaaatcgattttgacgatattctgctgctcgtatgccatatcatg
gatggttttcccgaagccgccgcccaaattcgttccaccatcggctggctcaccgtcgac
gagtatcaggacgtctcgcccctgcaacacaggctgctgaccctgtggctgggcggggga
ggacctgacggcaagagcgcaatgaaccgcaacgtatgcgtcgtgggcgatccggcccag
accatctactcgtttgccggtgcctccagctgggatctgctgcgtttcgccgatgaattc
gggccgctcgccgccgatgtcaatctcaacaccgactatcgttcgacgccggaagtcgtg
aacctcgccaaccgggtgcttgcggccgcgccgaaccgtgaggattacctgaaactggtt
tccgcccgtgaatccggcccgcgcgttacccgaaccgcttatgagagcgatatggaagag
gcacagggcgtggcggcacgcatagcccggctggttgccaacggggccaagccgtccgat
tgcgcgatcctcacccgcatcaacgcccaacagccggtattcggtgccgccttgcgcgct
gcgagactgaaatatcgcgtccgcaaggattcgggatggcaatcatccgcgctcgccgac
gatgccgcgtccaaacgcgcactattggaggcgatgggtttggacgccaccggacttgcc
gcaaacgacgatctcggggttacgatttccacgatccacgcatccaagggtctggaattc
aagcacgtgtttctgatcggctgttcggaagggctcttgccgtatggttcgccggaaacg
ggggatgcgctggaagaggaacgccggcttatgtatgtgggcatcacccgagctgaggat
tcgctgcatttgtcgtatgcacggaccaaggatggttatggagcgcagcgcagacgccca
tcacgatttttgtga
DBGET
integrated database retrieval system
