Bifidobacterium longum subsp. longum GT15: BLGT_09225
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Entry
BLGT_09225 CDS
T03452
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
blz
Bifidobacterium longum subsp. longum GT15
Pathway
blz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLGT_09225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blz03019
]
BLGT_09225
03016 Transfer RNA biogenesis [BR:
blz03016
]
BLGT_09225
Enzymes [BR:
blz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BLGT_09225
Messenger RNA biogenesis [BR:
blz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLGT_09225
Transfer RNA biogenesis [BR:
blz03016
]
Prokaryotic type
tRNA degradation factors
BLGT_09225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
PCB_OB
DUF1773
S1_2
Motif
Other DBs
NCBI-ProteinID:
AIW44317
LinkDB
All DBs
Position
complement(2119137..2121878)
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AA seq
913 aa
AA seq
DB search
MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVIENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKV
ICEAQDELKKIAAKETKEFQLFPEYTDELYARIDEIAHKDLDEALSIAEKLPRQDRIHEI
KEHVREVLADEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGKHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTSVPVEKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKAIIDQIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVIVQGVD
DRGKISLAIPGFEDQENNARPSRGDRDDRRGGRGRGDRDDRRGGRGRRSERDDRDFDDRD
DRPRRRRSDDFEDDYDDRPRRRRSDDRDFDRDDRDDDRPRRRRSADRDFDDRDDRDARDS
RDDDRPRRRRSSDRDDRGDRDDRRGGSRGRGRGSDRNPRYATDDNYDDYRADREERTERP
RRRVRRDFDPFED
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggccgttgaggccgtaatcgacaatggatcgtttggtaag
cgcacgctgcgcttcgagaccggccgcctcgcccagcaggccgatggcgctgtggccgcc
tacctcgacgacgattccatgattctgtccaccaccaccgccggttccagcccgaaggag
aactacgacttcttcccgctgaccgtcgatgttgaagagaagatgtacgctgccggcaag
atcccgggctcgttcttccgtcgtgaaggccgcccgagctccgaggccatcctcgcctgc
cgcatcatcgaccgcccgctgcgcccgctgttcccgcacaccctgcgcaacgaagtgcag
gtcgtcgagaccgtgctcgccgtgaaccctgatgacgcttacgatgtcatcgccctgaac
gccgcttccgcctccactatgatctccggcctgccgttcgaaggcccggtctccggtgtg
cgtctggcgctgatcgacggccagtgggtcgccttcccgcgttggagtgagcgtgagcgc
gccgtgttcgagattgtggtcgctggccgcgtgatcgagaacggtgatgttgccatcgcc
atgatcgaggcgggtgccggcaagaacgcctggcacctcatctatgacgagggtcagacc
aagcccgatgaggaggtcgtggccggtggtcttgaagccgccaagccgttcatcaaggtg
atctgcgaggctcaggatgagctcaagaagatcgccgccaaggagaccaaggaattccag
ctcttcccggagtacaccgacgagctctatgcccgtatcgacgagatcgctcacaaggat
ctggacgaggcgctctccatcgccgagaagctgccgcgtcaggaccgcatccacgagatc
aaggagcacgtgcgcgaggtgctcgcggacgagttcaccgatatggacgatgccgagaag
gacaaggaactcggcaacgccttcaaggaactgcagcgccagatcgtgcgtcgccgcatc
ctgaccgaggactaccgcatcgacggccgtggcctgcgcgacatccgcaccctgtccgcc
gaggtggacattgtgcctcgcgtgcacggttccgccctgttccagcgtggcgagacccag
attctgggcgtcaccacgctgaacatgctcaagatggagcagcagatcgacgcgctgtcc
ggtccgcagtccaagcgttacatgcacaactacgagatgccgccgtactccactggtgag
accggccgcgtcggttccccgaagcgccgcgaaatcggccacggcgccctcgccgagaag
gctctcgtgccggtgctgccgagccgcgaagagttcccctacgccatccgacaggtctcc
gaggccatcggttccaacggttccacttcgatgggttccgtgtgcgcctccacgctgagc
cttttggctgccggcgtgccgctgaaggctccggttgccggcatcgccatgggcctcgtg
tccggcgacgttgatggcaagcacatcttcaagaccctcaccgatattctgggtgccgag
gatgccttcggcgacatggacttcaaggtggccggtacttccgagttcatcaccgccctg
cagctcgacaccaagctcgacggcatccccgccgacatcctggccgccgctctgcagcag
gccaaggaagcccgcgccacgattctcgaggtcatcaacgagtgcatcgacggcccggcc
gagatgagcgagttcgctccgcgcatcatcaccacctccgtcccggttgagaagattggc
gaagtcatcggcccgaagggcaagatgatcaaccagattcaggaagacaccggcgctgaa
attgccatcgaggatgacggtaccgtcttcatctcctccgagggtggcgaggctgctgag
aaggccaaggccatcatcgaccagattgccaacccgcacgtgcccgaggccggcgaaacc
tacaacggcaaggtcgtcaagaccacgtcgttcggcgctttcgtgaacctcacccccggc
accgacggcctgctgcacatctcccagatccgcaacctggccaacggcgagcgtattgac
gctgtcgaagacgtgctcaaggaaggcgacaccgttgaggtgatcgttcagggtgtcgat
gatcgcggcaagatctccctggccattcctggtttcgaggatcaggagaacaacgcccgc
ccgagccgtggcgatcgcgatgaccgccgtggcggccgtggccgtggtgaccgtgacgat
cgccgtggcggccgtggccgtcgctccgagcgcgatgaccgtgacttcgacgatcgtgac
gaccgtccgcgtcgccgtcgctccgatgacttcgaggatgattacgacgaccgtccgcgt
cgccgtcgctccgatgaccgtgacttcgatcgcgatgatcgcgatgatgatcgtccgcgt
cgccgtcgttctgccgaccgtgacttcgacgatcgcgatgaccgtgatgctcgcgactcc
cgtgacgatgatcgtccgcgtcgccgtcgctcttccgatcgcgatgaccgtggcgatcgt
gatgaccgccgtggcggttcccgtggccgtggccgtggctcggaccgtaacccgcgctac
gccaccgacgacaactacgacgactaccgcgccgaccgcgaagagcgtactgagcgcccg
cgtcgccgcgtccgtcgcgactttgatccgttcgaggactaa
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