Bifidobacterium longum subsp. longum GT15: BLGT_09430
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Entry
BLGT_09430 CDS
T03452
Name
(GenBank) ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
blz
Bifidobacterium longum subsp. longum GT15
Pathway
blz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLGT_09430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blz03019
]
BLGT_09430
03009 Ribosome biogenesis [BR:
blz03009
]
BLGT_09430
Enzymes [BR:
blz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BLGT_09430
Messenger RNA biogenesis [BR:
blz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BLGT_09430
Ribosome biogenesis [BR:
blz03009
]
Prokaryotic type
rRNA processing factors
BLGT_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RD3
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AIW44336
LinkDB
All DBs
Position
complement(2181736..2184804)
Genome browser
AA seq
1022 aa
AA seq
DB search
MQRAARSIVPTDNREGFVNDGTDNSTVSNADSAAAVNAAPAAASQPAEPVRRRRGGRRVV
RGTGAAGASLELQVQERAPLFEAPALPDAGTAADSKSADSSDSDESSDSQDSAERPTRRR
SRRAASAVADSDSEDDRPRRSRRTVSADDFDDDDAPRSRRRSVVDDDDYDEDRPVRRRSR
SRQSDDDDYEDRPVRSRSRRASMDMDDDDEDRPVRRRSRRAVADTHEDTPDERLFDAVES
LPSGHEAVRRGKPMTSLLFQEPVLPAAVDAHDTADTRDDDVDDDERPSRRSRRSRSHDDD
DAQPRSRRRDDRDDRGRNAADRDTSRDASRNAAAGDANASANTDHDDFDSDDASDSRRSR
RSRRLNAQERRAAAEVEQIEEDLELDDIAYSPIAEEEGDEESDATRTRSRRRRRRGSRGE
TGANGEHDTAENDAEDTRSRRRDDRDDHDRDRDEDDEEQTVTRRRRRRRGGKNGEGTDDQ
SQNSEQPLVRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLMEQDFLARRE
NVDRLMVVREKEHHTQISVVEDNVLVEHYVSDIQEVQTVGNIYLGRVQNVLPSMEAAFVD
IGQARNGVLYAGEVNWDAARLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTL
AGRFLVLVPSGGMTGVSRKLSERERSRLKNIVSKIAPKDMGVIIRTAAEGASEDAIVKDL
ESLVRQWERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDDFSKLIVEGDKVYDRIE
EYLDTMAPDLKDKLEKWDPAEHEGKDVFDKWSIDSQLRKGMERQVYLPSGGSIVIDRTEA
MTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPANRD
LVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCKGRGFILHDQ
PTVSADYDDPYALRGGDPFVKTNKHGRGTAPAPEPAGSSADVKAKLAQIAAAAVAANNTA
EE
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgccgcgaggagcattgtgcccactgacaaccgtgaaggtttcgtcaacgac
ggaaccgataattcaaccgtatccaatgccgattcggctgcagccgtgaacgctgcgcct
gccgccgcctcccagcccgccgaacctgttcgccgtcgtcgtggcggccgccgcgtggtc
cgcggcaccggtgctgccggcgcttctctggaactgcaagtgcaggaacgcgccccgctg
ttcgaagcccccgcgcttcccgatgccggcactgcggccgattccaagtcagccgattcc
agcgattccgatgaatccagcgattcccaggattccgccgaacgtccaacccgccgccgt
tcgcgccgcgccgcttccgcagtggccgactcggatagcgaggatgatcgtcctcgtcgt
tcgcgccgcactgtcagtgccgatgatttcgatgacgatgacgccccacgttcccgccgc
cgttcggttgtggacgatgacgattacgacgaggaccgcccggttcgccgccgctctcgc
tcccgccagtccgacgatgatgactacgaggatcggccggttcgctcccgctctcgccgt
gcgtctatggatatggatgatgatgacgaggaccgtccggttcgccgtcgttctcgccgt
gcagttgcggatacgcacgaggacaccccggatgagcgcctgttcgacgcggtcgaatcc
ctgccctctggccacgaggccgtgcgtcgcggcaagccgatgacgtccctgctcttccag
gaaccggtactgcccgccgctgtggatgcgcacgataccgctgacactcgtgatgacgat
gttgacgacgacgaacgtccgtcgcgtcgctcccgccgctcgcgcagccacgatgatgac
gacgcgcagccgcgcagccgccgccgtgacgaccgtgacgatcgtggccgcaatgccgcc
gaccgtgatacgtctcgtgacgcttcccgcaacgctgccgccggtgacgccaatgccagc
gccaacacggaccatgatgatttcgattccgatgacgcttccgactctcgccgttcccgt
cgctcccgccgcctgaacgcccaggagcgccgtgcagccgccgaagtcgagcagattgag
gaagacctcgagctggacgatatcgcctactcgccgattgccgaagaggagggcgacgaa
gaatccgacgccacccgcacccgttcgcgccgtcgccgccgtcgcggctcacgcggcgaa
accggtgccaacggcgagcacgataccgccgagaacgatgccgaagatacgcgttcccgc
cgtcgtgacgatcgcgatgatcatgaccgtgatcgcgatgaggacgatgaggagcagacc
gttactcgccgtcgccgtcgccgtcgtggcggcaagaacggcgagggcaccgacgaccag
agtcagaacagcgaacagccgctggtccgacgctcccgcaagcagcagtacatcgacgag
atcactgatgtggagggctccactcgtctcgaggccaagaagcagcgccgccgtgacaac
cgccgtgagcgcagccgccagagccagctcatggaacaggacttcctcgcacgccgcgag
aacgtggaccgcctgatggtggtgcgtgagaaggaacatcacacccagatttccgtggtg
gaagacaatgttctggtcgagcattacgtctccgacattcaggaagtacagaccgtcggc
aacatctaccttggccgcgtgcagaacgtgctgcccagcatggaggccgcatttgtggac
atcggccaggcccgcaacggcgtactctacgccggcgaggtcaactgggatgccgctcgt
ctcgaaggccagccgcgccgcatcgagctggcgttcaagtccggcgacccggtgctcgtg
caggtcactaaggacccgatcggccacaagggtgcccgcctgacctctcaggtcacgctc
gccggccgcttcctggtgctcgtgccatccggcggcatgaccggcgtgagccgcaagctt
tcggagcgcgaacgcagccgtctgaagaacatcgtctccaagatcgccccgaaagacatg
ggcgtgatcatccgtaccgcagccgagggcgcatccgaagacgccatcgtcaaggatctc
gaatcactggtccgccagtgggagcgcatcaacgccaagcgcgaggaattctggcacggc
aagcgcccgaagctcctgcagggcgagcccgacgtggccatccgcgtggtgcgcgacatc
ttcaacgacgacttcagcaagctcatcgtggaaggtgacaaggtctacgaccgtatcgag
gaataccttgacaccatggcccccgacttgaaggacaagctggagaagtgggacccggcc
gagcatgaaggcaaggacgtgttcgacaagtggtccatcgactcccagctgcgtaagggc
atggagcgtcaggtctacctgccgtccggcggctcgattgtcatcgatcgcaccgaagcc
atgaccaccattgacgtgaacaccggccgctttatcggcaagggcaagtccttggaagaa
acggtgacgcgttgcaacctggaggcgtctgaagagatcgcccgccagctgcgcctgcgc
gatatcggtggcatggtgatgatcgactatgtggatatggtcatgcccgccaaccgcgat
ctggtgctgcgccgcttggtcgaatgcctggcacgcgaccgcaccaagcatcaggtggcc
gaagtcacctcgctcggtttggtgcagatgacccgcaagcgcatcggccagggtctggtc
gaggcgttctccgaggaatgcccgacctgcaagggccgtggtttcatcctgcatgatcag
ccgaccgtttcggccgactacgacgatccctacgcgcttcgcggtggcgacccgttcgtc
aaaaccaacaagcacggtcgcggcaccgctcccgctcccgaaccggctggttccagcgcc
gacgtcaaagccaaactggctcagattgccgccgctgccgtcgctgccaacaacacggcg
gaagagtga
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