KEGG   Burkholderia mallei ATCC 23344: BMA1280
Entry
BMA1280           CDS       T00204                                 
Name
(GenBank) hfq protein
  KO
K03666  host factor-I protein
Organism
bma  Burkholderia mallei ATCC 23344
Pathway
bma02024  Quorum sensing
bma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BMA1280
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BMA1280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bma03019]
    BMA1280
   03036 Chromosome and associated proteins [BR:bma03036]
    BMA1280
Messenger RNA biogenesis [BR:bma03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BMA1280
Chromosome and associated proteins [BR:bma03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BMA1280
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AAU47521
UniProt: A0A0H2WFL6
LinkDB
Position
1:1333032..1333643
AA seq 203 aa
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSREPRGDGGYGAREPREPREPRESYGAPQEGASTPSGTQ
ERNGNGPVIVTRRRRSLGPTDGQ
NT seq 612 nt   +upstreamnt  +downstreamnt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggcgacggcggctac
ggttcccgcgaaccgcgtggcgacggcggctatggcgcgcgcgagccgcgtgaaccgcgc
gagccccgcgagtcttacggcgcgccgcaagaaggcgcatcgacgccgtccggcacgcag
gaacgcaacggcaacggcccggtgatcgtcacgcgccgtcgccgttcgctcggcccgacc
gacggccaataa

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