Burkholderia mallei ATCC 23344: BMA1365
Help
Entry
BMA1365 CDS
T00204
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bma
Burkholderia mallei ATCC 23344
Pathway
bma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMA1365 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bma03021
]
BMA1365 (rho)
03019 Messenger RNA biogenesis [BR:
bma03019
]
BMA1365 (rho)
Transcription machinery [BR:
bma03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BMA1365 (rho)
Messenger RNA biogenesis [BR:
bma03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BMA1365 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Phostensin_N
Motif
Other DBs
NCBI-ProteinID:
AAU47600
UniProt:
A0A0H2WF96
LinkDB
All DBs
Position
1:1422902..1424164
Genome browser
AA seq
420 aa
AA seq
DB search
MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPKASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKNNAEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtctccgaattgatcgaaatggccaatggt
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgttcgccattctcaaa
aagcgcgccaagacgggagaaacgatcttcggcgacggcacgctcgaagtgctgccggac
ggtttcggcttcctgcgctcgccggaaatgtcgtatctcgcgagcacggacgacatctac
atcagcccgtcgcagatccgccgcttcaatctgcacaccggcgacacgatcgaaggtgaa
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaagtcaac
gggcagccgcccaaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcac
ccgaacaagccgctgtcgctcgagcgcgaaatgcgcggcgaggaaaacgtcacgggccgt
atcatcgacatgatcgccccgatcggcaagggccagcgcggcctgctcgtcgcgtcgccg
aagtccggcaagaccgtgatgctccagcacatcgcgcacgcgatcaagcagaaccatccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccccgaggaagtgaccgaaatgcag
cgctcggtcgccggcgaagtgatcgcgtcgacgttcgacgaaccggccacgcgccacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgcctcgtcgagatgaagcacgacgtc
gtgatcctgctcgactcgatcacgcgtctcgcgcgcgcctacaacaccgtgatcccggcg
tccggcaaggtgctgacgggcggcgtcgacgcgaacgcgctgcagcgcccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctcacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagaattcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtctacccgtcgatcaacctg
aacaagtcgggcacgcgccgcgaggaaatgctgatcaagcccgagatcctccagaagatc
tgggtgctgcgcaaattcatccacgacatggacgaagtcgaggcgatggaattcctgctc
gacaagatccgccagacgaagaacaacgccgagttcttcgatctgatgcgccgcggcggc
tga
DBGET
integrated database retrieval system
