Burkholderia mallei ATCC 23344: BMA1698
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Entry
BMA1698 CDS
T00204
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bma
Burkholderia mallei ATCC 23344
Pathway
bma03410
Base excision repair
bma03430
Mismatch repair
bma03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BMA1698 (recJ)
03430 Mismatch repair
BMA1698 (recJ)
03440 Homologous recombination
BMA1698 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bma03400
]
BMA1698 (recJ)
DNA repair and recombination proteins [BR:
bma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BMA1698 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BMA1698 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BMA1698 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
AAU47809
UniProt:
A0A0H2WEF8
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All DBs
Position
1:1770329..1772023
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AA seq
564 aa
AA seq
DB search
MTRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQA
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
HQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSIPGFHLRDAIDLISKREPDLI
VTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARAT
LAFRLASDTWNGTTRVQLIVEHAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgtcacccgctccgccgttcccgccgcgctcgacgcgctcgcccgccac
gggctgcatcccgtgctcgcccgcctctacgcggcgcgcggaatcgcctcgcccgccgac
gtcgaaaccgcgctgtcgcgcctcgtgccgcccgcgcagctcaagggctgcgcgcaggcc
gccgcgctcctcgccgacgcgctcgaggccggccgcaagatgctcgtcgtcgccgattac
gactgcgacggcgcgaccgcctgcgcggttgccgtgcgcggcctgcggatgttcggcgcg
aagatcgattacctcgtgccgaaccgcttcgaatacggctacgggctcacgcccgagatc
gtcgagctcgcggccgcgagaaagcccgacctgctgatcaccgtcgacaacggaatcgcg
agcgtcgacggcgtcgcggccgcgaacgcgcgcggcatcgacgtgctcgtcaccgatcac
catctgcccggcgacacgctgcccgccgcgcgcgcgatcgtcaatccgaaccagcccggc
tgcgcgttcccgagcaagcatatcgcgggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgcgcgcgcggcgcgttcggcgacgcccgccccgagccgcggctc
gacgggctgctcgatctcgtcgcgctcggcacggtggccgacgtcgtgcggctcgacggc
aacaaccgcgtgctcgtcgcgcaaggcctgcagcgcatccgcaacggacggatgcagccc
ggcatcgccgcgctctttcgcgcggccgcgcgcgacgcgcgcagcgcatcgggcttcgat
ctcggcttcggcctcggcccgcgcctgaacgcggcgggccgcctgtcggacatgtcgctc
ggcatcgaatgcctgacgaccgacgacgtgggccgcgcgtgggaactcgcgcagcagctc
gacgcgatgaaccgcgagcggcgcgagatcgaggccggcatgcagcagcaggcactcgcc
gatctcgcgtcggtcgaccccgccgaggcggccaccatcacgctcttcaaccccgaatgg
caccagggcgtgatcgggatcgtcgcggggcggctcaaggagcgctttcaccggccggcg
ttcacgttcgcgcacgcggacgacggcggcgcgcgcgtgaagggctccggccgctcgatt
cccggcttccatctgcgcgatgcgatcgacctgatctcgaagcgcgaacccgatctgatc
gtcacgttcggcggccacgcgatggccgcgggcgtcacgctcgagaccgcgaacgtgccg
cgcttcgcggccgcgttcgagacggtcgcgcgcgaatggctgtccgacgacgcgctcgcg
cgggtgatcgagacggacggcgatctcgaggatgcctacttcacgccgcaggtggtcgag
ctgctcgatgcggccgtctggggccagggcttcccggcgccgctcttctcgggcgaattc
gacgtcgcctcgcaggcgctcgtcaaggacaagcacctgaagctgcaattgacgcgcggc
cgccagcgcttcaacgcgatctggttcaatcacgcggagccgctgcccgcgcgcgcgacc
ctcgcgttccggctcgcgagcgatacgtggaacggcacgacgcgcgtgcaactgatcgtc
gagcacgcggcgtag
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integrated database retrieval system
