Pseudoblastomonas marina: T8S45_00385
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Entry
T8S45_00385 CDS
T09636
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bmaa
Pseudoblastomonas marina
Pathway
bmaa00300
Lysine biosynthesis
bmaa00470
D-Amino acid metabolism
bmaa01100
Metabolic pathways
bmaa01110
Biosynthesis of secondary metabolites
bmaa01120
Microbial metabolism in diverse environments
bmaa01230
Biosynthesis of amino acids
Module
bmaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
T8S45_00385 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T8S45_00385 (lysA)
Enzymes [BR:
bmaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
T8S45_00385 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WPZ04024
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Position
90340..91599
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AA seq
419 aa
AA seq
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MDHFSLRDGVLHAEDVSLPQIADAVDTPVYVYSRATLERHAQVFVEGLAALDAPLIAFAV
KANPNLAVLKVLAQQGFGADVVSGGELARALAAGMPPERIVFSGVGKTRTEMQAALDAGI
RQLNIESEEEGRELAELAAARGENARCVLRINPDIDAGTHDKITTGKADNKFGVPIARAR
ELFDALAGLDGLALRGVAVHIGSQLASLDPLEAAFEKIGALVRELREAGHPIDTVDLGGG
LGVPYKAGETYPSPAEYGAMVARVTEGWDVQLVFEPGRVIAGNAGVLLTRVIRVKRGVNH
PFYVLDAAMNDLARPAMYGAWHDIVAVEPSGERTTANVVGPICETGDTFAMDREMDRLAA
GDLAVLRTAGAYGATMASSYNSRGFVPEVLVDGEKFAVVAERLSAAAIMDAEPIPDWLD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttctcgcttcgtgacggcgtgctccacgccgaggacgtatcgctgccgcag
atcgccgacgcggtcgatacgccggtctacgtctattcgcgcgccacgctcgagcgccat
gcgcaggtcttcgtcgaaggtctggcggcgcttgatgctccgctgatcgctttcgcggtc
aaggccaatcccaaccttgccgtgctcaaggtgctggcgcagcagggcttcggcgccgat
gtggtctcgggcggcgagctggcgcgcgcgctggcggcgggtatgccgcccgaacggatc
gtattctcgggcgtgggcaagacccgcaccgagatgcaagccgcgctcgatgcgggcatc
cgccagctcaatatcgaaagcgaggaggaaggtcgcgaactggccgagcttgccgccgcg
cgcggcgagaatgcgcgttgcgtgctgcgaatcaatcccgacatcgatgccgggacgcac
gacaagatcaccaccggcaaggccgacaacaagttcggagtcccgatcgcccgcgcgcgc
gaattgttcgatgcgctggccgggctcgacgggctcgccctgcgcggagtcgcggtccat
atcggcagccagctggcctcgctcgatccgctcgaggcggcgttcgagaagatcggtgcg
ctggtgcgggaactacgcgaggcgggccacccgatcgacacggtcgatctcggcggcggc
ctcggcgtgccttacaaggcgggcgagacctatccgagtccagccgaatacggtgcgatg
gtcgcgcgcgtcaccgagggttgggacgtccagctggtgttcgaaccgggacgggtgatc
gcgggcaatgccggcgtccttctgacccgggtgatccgcgtgaagcgtggagtgaaccac
ccgttctacgtgctcgacgcggcgatgaacgacctggcccgcccggcgatgtacggcgcg
tggcacgatatcgtcgcggtcgaaccctcgggagagcgcacgacggcgaacgtcgtcggg
cctatctgcgagaccggcgatacctttgcaatggaccgcgagatggaccggctcgccgcg
ggcgatcttgccgtgcttcgcaccgccggggcctatggcgcgacgatggcatcgagctac
aacagccgcggtttcgtgcccgaggtgctggtcgacggtgaaaaattcgcggtggtggcc
gaacgcctgagtgcggcggcgatcatggatgccgaaccgatccccgactggctggattaa
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