Pseudoblastomonas marina: T8S45_01445
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Entry
T8S45_01445 CDS
T09636
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bmaa
Pseudoblastomonas marina
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bmaa03009
]
T8S45_01445 (rimO)
Enzymes [BR:
bmaa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
T8S45_01445 (rimO)
Ribosome biogenesis [BR:
bmaa03009
]
Prokaryotic type
ribosomal protein modification factors
T8S45_01445 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Mur_ligase_C
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
WPZ04224
LinkDB
All DBs
Position
complement(310935..312302)
Genome browser
AA seq
455 aa
AA seq
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MATRIEDAPKVGMVSLGCPKALVDSERILTRLRADGYAMSPDYAGADVVLVNTCGFLDSA
KEESLQAIGEAIAENGRVIVTGCMGEDAEAIRAAHPQVLAVTGAHQYEQVVEAVHEAAPP
ARGPFVDLIPQPDIKLTPRHYGYLKISEGCNHSCAFCIIPQLRGKLASRRVDAVLREAEK
LVAAGTKELLVISQDTSAYGVDIRHESRDWKGSDVRAHMTDLARELGGLRTADGVPPWIR
LHYVYPYPHVDAVIPLMAEGLVTPYLDIPFQHAARSVLKAMKRPANEAKVLERLKGWREI
CPDLTVRSSFVVGFPGETEDDFKYLLDWLEEAQLDRVGGFRFEPVEGAQANDLPDPVPEA
VKEERYARLMEVTERISAAKLQAKVGKTLPVIVDEVGEPDEDGDIGATARSQADAPEIDG
AVYLRNVAETLAAGDIIEVTVEDADAHDLYGVPTA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacggatcgaagacgccccgaaggtgggcatggtcagccttggctgtcccaaa
gcgctggtggattccgagcgcatcctcacgcggctgcgcgccgacggctacgcgatgagc
cccgactatgccggcgccgacgtggtgctcgtcaacacctgcggcttcctcgatagcgcc
aaggaggaaagcctccaggcgatcggcgaggcgatcgcggagaacgggcgcgtgatcgtg
accggctgcatgggcgaggatgccgaggcgatccgcgccgcgcacccgcaagtgctcgcg
gtgaccggcgcacaccagtacgaacaggtggtcgaggccgtgcacgaggccgcgccgccc
gcgcgcggacctttcgttgacctgatcccgcagcccgacatcaagctcaccccgcgccac
tacggctatctcaagatctccgagggctgcaaccatagctgcgccttctgcatcatcccg
caattgcgcgggaagctcgccagccgccgcgtcgacgcggtgctgcgcgaggcggagaag
ctggttgcggcggggaccaaggaattgctcgtcatcagccaggatacctcggcctacggc
gtcgatatccgccacgagagccgcgactggaagggcagcgatgtgcgcgcgcacatgacc
gacctcgcgcgcgagctcggcggcctgcggacggcggacggcgtgccgccgtggatccgg
ctgcactacgtctacccctacccccatgtcgacgcggtgatcccgctgatggccgaaggg
ctggtgacgccctatctcgacatcccgttccagcacgccgcgcgctccgtcctgaaagcg
atgaagcgcccggcgaacgaggccaaggtgctcgaaaggttgaagggctggcgcgagatc
tgccccgacctcaccgtgcgttccagcttcgtggtcggctttcccggcgagaccgaggac
gatttcaagtatctgctcgactggctcgaggaagcgcagctcgaccgcgtcggcggcttc
cgcttcgaaccggtcgagggcgcgcaggcgaacgacctccccgatccggtgcccgaagcg
gtcaaggaagagcgctatgcgcggctgatggaagtgaccgagcggatttccgccgccaag
ctgcaggcgaaggtcggcaagacgttaccggtgatcgtcgacgaggtcggcgagcccgac
gaggacggcgatatcggcgcgaccgcgcgcagccaggccgacgcccccgagatcgacggc
gcggtgtacctgcgcaatgtcgccgagacgctcgcggcgggcgatatcatcgaagtcacc
gtcgaggacgccgacgcgcacgacctttatggcgtgccgaccgcctga
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