Pseudoblastomonas marina: T8S45_02810
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Entry
T8S45_02810 CDS
T09636
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bmaa
Pseudoblastomonas marina
Pathway
bmaa03420
Nucleotide excision repair
bmaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T8S45_02810
03430 Mismatch repair
T8S45_02810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmaa03400
]
T8S45_02810
Enzymes [BR:
bmaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T8S45_02810
DNA repair and recombination proteins [BR:
bmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T8S45_02810
MMR (mismatch excision repair)
Other MMR factors
T8S45_02810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WPZ05285
LinkDB
All DBs
Position
complement(589477..591777)
Genome browser
AA seq
766 aa
AA seq
DB search
MSPNSPESEISDGERAFLTRLNPPQREAVTTTDGPVLMLAGAGTGKTAALTHRLAYLVNK
QLAWPSEILCVTFTNKAAREMRERVGQLLGDRVEGMPWLGTFHSIGAKMLRRHAELVGLE
SNFTIIDTDDQIRLLKQLIQQNDLDEKRWPARQLAGLIDRWKNRGLNPVDIDAAESEAYA
NGKGQKFYKLYQDRLKALNACDFGDLLLHMLNIFRKEREVLALYQQRFKYIMVDEYQDTN
AVQYLWLRLLAQERKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGCKVVKLEQNYRST
PHILGAASGLIRANSERHEKDLWTEVDAGEKVRVIGVWDGPEEARRVGEEIERLEGEGAD
LNKVAILVRAQYQTREFEDRFIQIGVNYRIVGGFRFYERAEIRDALAYLRVIAQPQDDLA
FERIYNQPKRGLGAKTLEAMHRHARATGMSLAAASLDLANSDELPKRASGTIAALLRDFL
RWREISEQVPPADLLRTVVQESGYEDMLNKDRSAEAAGRLENLSELARAMEDYDTLGDFL
EHVALVMDNDASDEAEKVTIMTIHAAKGLEFDNLFLPGWEEGVFPSQRSLDEGGLASLEE
ERRLAYVAITRARRRCTIVHAANRRIYGQWTSSIPSRFVDELPDEHVDSETTLTGGASMW
RANFSERDDPFAHVARDAPGRAGSRGPGWQRAVASGYDAAPKRLPEPKRSAASFAAKPRT
DIAIGDRVFHDKFGYGEVLGQEGNKLEIEFEKAGTKRVIDSFVSAA
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atttcccccaattcccccgaaagcgagatcagcgatggcgagcgcgccttcctcacgcgg
ttgaacccgccgcagcgcgaggccgtgaccacgacggacggccccgtcctgatgctggcg
ggcgcgggcacggggaaaaccgccgcgctcacccaccggctcgcctacctcgtcaacaag
cagctcgcctggccgagcgagatcctttgcgtcaccttcaccaacaaggcggcgcgcgag
atgcgcgagcgggtcgggcaattgctgggcgatcgggtcgaggggatgccgtggctcggc
accttccactcgatcggggcgaaaatgctgcgtcgccatgccgaactggtcgggctcgag
agcaatttcacgatcatcgataccgacgaccagatccggctgctcaagcagctgatccag
cagaacgatctagacgagaagcgctggcccgcgcgccagctcgccgggctgatcgatcgc
tggaagaatcgcgggctcaacccggtcgatatcgatgcggcggaaagcgaagcctatgcc
aacggaaagggccagaagttctacaagctctatcaggaccggctgaaagcgctgaatgcc
tgcgatttcggcgatttgctgctccacatgctcaacatcttccgcaaggaacgcgaggtg
ctcgcgctgtaccagcagcgcttcaagtatatcatggtcgacgagtatcaggacaccaat
gcggtccagtacctgtggctgcggctgctcgcgcaggagcgcaagaatatctgcgtggtg
ggcgacgacgaccagtcgatctattcctggcgcggagcagaagttgccaacatcctgcgg
ttcgagaaggactttcccggctgcaaggtcgtgaagctggagcaaaactaccgctccacg
ccgcacatccttggtgccgcgtcgggcctgatccgcgccaatagcgagcggcacgagaag
gatttgtggaccgaggtcgacgcgggcgagaaagttcgcgtgatcggcgtgtgggacgga
cccgaggaagcccgccgcgtgggcgaggagatcgagcggctcgaaggcgaaggcgccgat
ctcaacaaggtcgcgatcttggtgcgcgcacaatatcagacacgcgaattcgaagatcgc
ttcatccagatcggggtcaactatcgcatcgtcggcggcttccgcttctacgagcgcgcc
gaaatccgcgatgcgctcgcttacctgcgtgtgatcgcacagccgcaggacgacctagcc
ttcgagcgcatctacaaccagcccaaacgcgggctcggggcgaagacattggaagcgatg
caccgacacgcccgcgccaccggcatgtcgctcgccgctgcctcgctcgacctcgccaat
agcgacgagctgcccaaacgcgcgagcggcacgatcgccgcgctgctgcgcgatttcctc
cgctggcgggagatcagcgagcaggtcccgcccgccgacctgctccgcaccgtggtgcag
gaatcgggctatgaggacatgctcaacaaggaccgcagcgccgaggctgcggggcggctc
gaaaacctctccgaactcgcccgcgcgatggaggattacgacacgcttggcgatttcctc
gaacatgtcgcgctggtgatggacaacgatgcgtcggacgaggccgagaaggtcacgatc
atgacgatccacgccgccaaggggctcgaattcgacaatctattcctgcccggctgggag
gaaggcgtgttcccttcgcagcgctcgctcgatgagggcggattggcgagcctcgaggag
gaacgccgcctcgcctatgtcgcgatcacccgcgcgcggcgccgctgcacgatcgtccac
gccgccaatcgccgtatctacggccagtggaccagttcgatcccctcgcgctttgtcgac
gaattgcccgacgagcatgtcgacagcgaaaccaccctgaccgggggcgcttcgatgtgg
cgcgccaatttctccgagcgcgacgatcccttcgcgcatgtcgcgcgcgacgcccccgga
cgcgccgggtctcgcggcccgggctggcagcgcgcggtggcaagcggttacgacgccgcg
cccaagcgcctgcccgaaccaaagcgcagcgccgccagcttcgccgccaagccgcgcacc
gacatcgcgatcggcgaccgcgtgttccacgacaagttcggctatggcgaagtgctcgga
caggaaggcaacaagctcgagatcgaattcgagaaggccgggaccaagcgcgtgatcgac
agcttcgtcagcgcggcctga
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