Pseudoblastomonas marina: T8S45_04120
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Entry
T8S45_04120 CDS
T09636
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bmaa
Pseudoblastomonas marina
Pathway
bmaa00010
Glycolysis / Gluconeogenesis
bmaa00020
Citrate cycle (TCA cycle)
bmaa00260
Glycine, serine and threonine metabolism
bmaa00280
Valine, leucine and isoleucine degradation
bmaa00310
Lysine degradation
bmaa00380
Tryptophan metabolism
bmaa00620
Pyruvate metabolism
bmaa00630
Glyoxylate and dicarboxylate metabolism
bmaa00640
Propanoate metabolism
bmaa00670
One carbon pool by folate
bmaa00785
Lipoic acid metabolism
bmaa01100
Metabolic pathways
bmaa01110
Biosynthesis of secondary metabolites
bmaa01120
Microbial metabolism in diverse environments
bmaa01200
Carbon metabolism
bmaa01210
2-Oxocarboxylic acid metabolism
bmaa01240
Biosynthesis of cofactors
Module
bmaa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bmaa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bmaa_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bmaa_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
T8S45_04120 (lpdA)
00020 Citrate cycle (TCA cycle)
T8S45_04120 (lpdA)
00620 Pyruvate metabolism
T8S45_04120 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
T8S45_04120 (lpdA)
00640 Propanoate metabolism
T8S45_04120 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T8S45_04120 (lpdA)
00280 Valine, leucine and isoleucine degradation
T8S45_04120 (lpdA)
00310 Lysine degradation
T8S45_04120 (lpdA)
00380 Tryptophan metabolism
T8S45_04120 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
T8S45_04120 (lpdA)
00670 One carbon pool by folate
T8S45_04120 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bmaa04147
]
T8S45_04120 (lpdA)
Enzymes [BR:
bmaa01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
T8S45_04120 (lpdA)
Exosome [BR:
bmaa04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
T8S45_04120 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_oxidored
FAD_binding_2
GIDA
HI0933_like
FAD_binding_3
Thi4
DAO
Lys_Orn_oxgnase
2-Hacid_dh_C
AlaDh_PNT_C
3HCDH_N
2OG-FeII_Oxy_6
Motif
Other DBs
NCBI-ProteinID:
WPZ04735
LinkDB
All DBs
Position
complement(845819..847231)
Genome browser
AA seq
470 aa
AA seq
DB search
MADKYDVIVLGSGPGGYVAAIRCAQLGLKTAIVERELLGGICLNWGCIPTKALLRSAEIL
HYAQHAKDYGLKIAGAIEADLEAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGEGTLTGP
TSLTVKSDKGEEKLEARHVIVATGARARDLPFAKADGKRVWTYRHAMTPPEMPKKLLVIG
SGAIGIEFASFYNDMGCDVTVVEMLDRIVPVEDKDVSAFLNKSLTKQGMTIMTGAGVEDL
KVTNKGVKAKIKDAKGKVSETEFTHCIVAIGIVPNTENVGLEKLVEMDRGFIQIDDYGHT
KSKGLWAIGDCTPGPWLAHKASHEGVTTAEAIAKELGNKDVHPHPLDRNNIPGCTYCHPQ
IASVGLTEEKAEEAGYEVKAGTFPFIGNGKAIALGEADGFCKTVFDAKTGELLGAHMVGA
EVTEMIQGFVVGKTLETTEAELMQTIFPHPTISESMHESVLASYGRVIHV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagtatgacgtaatcgtattgggctccggtcccgggggctatgttgcggcg
atccgctgcgcgcagctcgggctcaagaccgcgatcgtcgaacgcgaactgctgggcggc
atctgcctcaactggggttgcatccccaccaaggcgctgctccgcagtgccgagatcctc
cattatgcgcagcatgcgaaggattacggcctcaagatcgcgggcgcgatcgaggccgat
ctcgaagcggtggtgaagcgcagccgcggcgtcgccaagcagctgaaccagggcgtcacg
cacctgatgaagaagaacaagatcgccgttcacatgggcgaggggacgctgaccggtccg
acctcgctgacggtgaaatccgacaagggcgaagaaaagctcgaggccaggcacgtcatc
gtcgccaccggggcccgcgcgcgcgacctgcctttcgccaaggccgacggcaagcgcgtc
tggacctatcgccacgccatgacgccacccgaaatgcccaagaagctgctggtgatcgga
tcgggcgcgatcgggatcgagttcgcgagcttctacaacgacatgggctgcgacgtcacc
gtggtcgaaatgctcgaccggatcgtgccggtcgaagacaaggatgtctcggccttcctc
aacaagtcgctcaccaagcagggcatgacgatcatgaccggcgcgggggtcgaagacctc
aaggtcaccaacaagggcgtgaaggccaagatcaaggacgccaagggcaaggtcagcgag
accgagttcacccactgcatcgtcgcgatcgggatcgtccccaacaccgagaatgtcggg
ctcgagaagctcgtcgaaatggatcgcggcttcatccagatcgacgattacgggcacacc
aagtcgaaaggtctctgggcgatcggcgactgcaccccgggcccgtggctggcgcacaag
gcgagccatgaaggcgtcaccaccgccgaggcgatcgccaaggagctcggcaacaaggac
gtccatccgcacccgctcgaccgcaacaacatcccgggttgcacctattgccacccgcag
atcgccagcgtcgggctgaccgaggaaaaggcggaggaagccggttacgaagtcaaggcc
ggcacgttccccttcatcggcaacggcaaggcgatcgcgctgggcgaggccgacggattc
tgcaagaccgtgttcgacgccaagaccggcgagctgctcggcgcgcacatggtcggcgcg
gaagtgaccgagatgatccagggcttcgtcgtcggcaagacgctcgagaccaccgaggcc
gagctgatgcagacgatcttcccgcacccgacgatttccgagtcgatgcacgaaagcgtg
ctcgccagctatggccgcgtgatccacgtctga
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