KEGG   Pseudoblastomonas marina: T8S45_04120
Entry
T8S45_04120       CDS       T09636                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bmaa  Pseudoblastomonas marina
Pathway
bmaa00010  Glycolysis / Gluconeogenesis
bmaa00020  Citrate cycle (TCA cycle)
bmaa00260  Glycine, serine and threonine metabolism
bmaa00280  Valine, leucine and isoleucine degradation
bmaa00310  Lysine degradation
bmaa00380  Tryptophan metabolism
bmaa00620  Pyruvate metabolism
bmaa00630  Glyoxylate and dicarboxylate metabolism
bmaa00640  Propanoate metabolism
bmaa00670  One carbon pool by folate
bmaa00785  Lipoic acid metabolism
bmaa01100  Metabolic pathways
bmaa01110  Biosynthesis of secondary metabolites
bmaa01120  Microbial metabolism in diverse environments
bmaa01200  Carbon metabolism
bmaa01210  2-Oxocarboxylic acid metabolism
bmaa01240  Biosynthesis of cofactors
Module
bmaa_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bmaa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bmaa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bmaa_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bmaa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    T8S45_04120 (lpdA)
   00020 Citrate cycle (TCA cycle)
    T8S45_04120 (lpdA)
   00620 Pyruvate metabolism
    T8S45_04120 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    T8S45_04120 (lpdA)
   00640 Propanoate metabolism
    T8S45_04120 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    T8S45_04120 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    T8S45_04120 (lpdA)
   00310 Lysine degradation
    T8S45_04120 (lpdA)
   00380 Tryptophan metabolism
    T8S45_04120 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    T8S45_04120 (lpdA)
   00670 One carbon pool by folate
    T8S45_04120 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bmaa04147]
    T8S45_04120 (lpdA)
Enzymes [BR:bmaa01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     T8S45_04120 (lpdA)
Exosome [BR:bmaa04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   T8S45_04120 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 FAD_oxidored FAD_binding_2 GIDA HI0933_like FAD_binding_3 Thi4 DAO Lys_Orn_oxgnase 2-Hacid_dh_C AlaDh_PNT_C 3HCDH_N 2OG-FeII_Oxy_6
Other DBs
NCBI-ProteinID: WPZ04735
LinkDB
Position
complement(845819..847231)
AA seq 470 aa
MADKYDVIVLGSGPGGYVAAIRCAQLGLKTAIVERELLGGICLNWGCIPTKALLRSAEIL
HYAQHAKDYGLKIAGAIEADLEAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGEGTLTGP
TSLTVKSDKGEEKLEARHVIVATGARARDLPFAKADGKRVWTYRHAMTPPEMPKKLLVIG
SGAIGIEFASFYNDMGCDVTVVEMLDRIVPVEDKDVSAFLNKSLTKQGMTIMTGAGVEDL
KVTNKGVKAKIKDAKGKVSETEFTHCIVAIGIVPNTENVGLEKLVEMDRGFIQIDDYGHT
KSKGLWAIGDCTPGPWLAHKASHEGVTTAEAIAKELGNKDVHPHPLDRNNIPGCTYCHPQ
IASVGLTEEKAEEAGYEVKAGTFPFIGNGKAIALGEADGFCKTVFDAKTGELLGAHMVGA
EVTEMIQGFVVGKTLETTEAELMQTIFPHPTISESMHESVLASYGRVIHV
NT seq 1413 nt   +upstreamnt  +downstreamnt
atggctgacaagtatgacgtaatcgtattgggctccggtcccgggggctatgttgcggcg
atccgctgcgcgcagctcgggctcaagaccgcgatcgtcgaacgcgaactgctgggcggc
atctgcctcaactggggttgcatccccaccaaggcgctgctccgcagtgccgagatcctc
cattatgcgcagcatgcgaaggattacggcctcaagatcgcgggcgcgatcgaggccgat
ctcgaagcggtggtgaagcgcagccgcggcgtcgccaagcagctgaaccagggcgtcacg
cacctgatgaagaagaacaagatcgccgttcacatgggcgaggggacgctgaccggtccg
acctcgctgacggtgaaatccgacaagggcgaagaaaagctcgaggccaggcacgtcatc
gtcgccaccggggcccgcgcgcgcgacctgcctttcgccaaggccgacggcaagcgcgtc
tggacctatcgccacgccatgacgccacccgaaatgcccaagaagctgctggtgatcgga
tcgggcgcgatcgggatcgagttcgcgagcttctacaacgacatgggctgcgacgtcacc
gtggtcgaaatgctcgaccggatcgtgccggtcgaagacaaggatgtctcggccttcctc
aacaagtcgctcaccaagcagggcatgacgatcatgaccggcgcgggggtcgaagacctc
aaggtcaccaacaagggcgtgaaggccaagatcaaggacgccaagggcaaggtcagcgag
accgagttcacccactgcatcgtcgcgatcgggatcgtccccaacaccgagaatgtcggg
ctcgagaagctcgtcgaaatggatcgcggcttcatccagatcgacgattacgggcacacc
aagtcgaaaggtctctgggcgatcggcgactgcaccccgggcccgtggctggcgcacaag
gcgagccatgaaggcgtcaccaccgccgaggcgatcgccaaggagctcggcaacaaggac
gtccatccgcacccgctcgaccgcaacaacatcccgggttgcacctattgccacccgcag
atcgccagcgtcgggctgaccgaggaaaaggcggaggaagccggttacgaagtcaaggcc
ggcacgttccccttcatcggcaacggcaaggcgatcgcgctgggcgaggccgacggattc
tgcaagaccgtgttcgacgccaagaccggcgagctgctcggcgcgcacatggtcggcgcg
gaagtgaccgagatgatccagggcttcgtcgtcggcaagacgctcgagaccaccgaggcc
gagctgatgcagacgatcttcccgcacccgacgatttccgagtcgatgcacgaaagcgtg
ctcgccagctatggccgcgtgatccacgtctga

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