Pseudoblastomonas marina: T8S45_05270
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Entry
T8S45_05270 CDS
T09636
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bmaa
Pseudoblastomonas marina
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmaa03400
]
T8S45_05270
Enzymes [BR:
bmaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
T8S45_05270
DNA repair and recombination proteins [BR:
bmaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
T8S45_05270
Prokaryotic type
T8S45_05270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPZ04953
LinkDB
All DBs
Position
complement(1088829..1090220)
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AA seq
463 aa
AA seq
DB search
MSSPQIVWLRRDLRLVDQPALHAAAEIGPVIPVYVLDDDRAGDHAYGGASRWWLHHSLES
LGRSLGSRRSRIVLRQGDAPQVLAAIADKVGAGAIHANRHYEPWWKEAEDELADALGDQC
ELVLHDGNYLMPPGSVTTGSGDPYKIYSPFARSLLECLPPRDALDAPATLHSPESWPESD
DVDDWNLLPTGPDWAGGLRDFWEVGEDAAHARLDWWADEVADYDEGRNLPSQDITSRLSP
HLHWGEISPVQIYHRLKDLRSDGWQTFLKEIVWRDYAQNVICQFPDYARESYREYDERKL
WRNPDAGHLIREDLACWQQGMTGYPIVDAGMRQLWQTGWMHNRVRMICASFLVKHLLIDW
RHGEQWYWDCLVDADYGNNGVNWQWISGTGVDSNMFVRIMAPLTQSEKFDAAGYIREYVP
ELAGLSDDEIHDPADDRRGNYPVKMIGHKEARERALEAHRAAK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccccagatcgtctggctgcggcgcgacctgcgcctcgtcgaccaacccgcc
ctccatgccgccgccgaaatcggcccggtgatcccggtctacgtgctcgacgacgaccgc
gcgggcgaccatgcctatggcggcgcctcgcgctggtggctgcaccattcgctcgaaagc
ctcggcaggtcgctcggaagccgtcgttcgcgcatcgtcttgcggcagggcgatgccccg
caggtgctcgccgcgattgccgacaaagtaggcgcgggcgcgatccatgccaatcgccat
tacgaaccctggtggaaggaggccgaggacgaactcgcggacgcgctaggcgaccaatgc
gagttggtgctccacgacggcaattacctgatgccgccgggcagcgtgacgaccggttcg
ggcgatccctacaagatctattcgcccttcgcccgttcgctgctcgaatgtctcccgccg
cgcgatgcactcgacgcgcccgctacgctgcattctcccgagagctggcccgagagcgac
gacgtcgacgattggaacctgctcccgaccgggcccgactgggcgggcggcctgcgcgat
ttctgggaggtgggcgaggatgccgcccacgcgcggctcgactggtgggccgacgaggtc
gccgattacgacgagggccgcaacctgccttcgcaggacatcacctcgcgcctctcaccg
catctccactggggcgagatttcacccgtacaaatctatcaccggctcaaggacctgcgc
tcggacggctggcagaccttcctcaaggagatcgtctggcgcgattatgcgcagaacgtg
atctgccaattccccgattatgcgcgcgagagctatcgcgaatatgacgagcgcaaactg
tggcggaaccccgatgccgggcacctgatccgtgaggacctcgcatgctggcagcagggc
atgaccggctatcccatcgtcgatgccgggatgcgccagctgtggcagaccggctggatg
cacaaccgggtgcggatgatctgcgccagcttcctcgtcaaacacctgctgatcgactgg
cggcatggcgagcagtggtactgggactgcctcgtcgatgccgattacggcaacaatggc
gtcaactggcagtggatcagcggcaccggggtcgacagcaacatgttcgtgcggatcatg
gccccgctgacccagagcgagaagttcgacgcggcgggctatatccgcgaatacgtcccc
gaactcgccggtctgagcgacgacgagatccacgatcccgccgacgacaggcgcggcaat
tacccggtcaagatgatcggtcacaaggaagcgcgcgaacgggcgctggaagcccatcgc
gccgccaaatag
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