Pseudoblastomonas marina: T8S45_05715
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Entry
T8S45_05715 CDS
T09636
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
bmaa
Pseudoblastomonas marina
Pathway
bmaa00300
Lysine biosynthesis
bmaa00470
D-Amino acid metabolism
bmaa01100
Metabolic pathways
bmaa01110
Biosynthesis of secondary metabolites
bmaa01120
Microbial metabolism in diverse environments
bmaa01230
Biosynthesis of amino acids
Module
bmaa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
T8S45_05715 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T8S45_05715 (dapF)
Enzymes [BR:
bmaa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
T8S45_05715 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WPZ05034
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All DBs
Position
1181778..1182593
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AA seq
271 aa
AA seq
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MRVDFTKMHGLGNDFVVIDQRARENVHMDRAMAAALADRNTGIGCDQVILLEPSEVADFR
MRIFNADGGEVEACGNASRAIALFHGSAARIETGGGMLEVTPEGGGAAVAMGRPRFGWKD
IPLDYGMDTSEMPLSWDGLERPFAVNVGNPHAVFFVTATEDVELGSLGPTIERDPVFPEG
VNVGVASVASRDRISLRVWERGAGLTRACGTGACAAVVAAVERGLTDRIVTVALPGGELV
ISYDEDGQITMRGPASESFRGSFDPADYGAA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgatttcaccaagatgcacgggctcggcaacgactttgtcgtgatcgaccag
cgcgcgcgcgaaaacgtgcacatggaccgcgcaatggcggccgccctcgccgatcgcaac
accggcatcggctgcgaccaagtgatcctgctcgaaccgtccgaagtcgccgatttccgc
atgcggatcttcaacgccgatggcggcgaggtcgaggcctgcggcaacgcctcgcgcgcg
atcgcgcttttccacggcagcgccgcccggatcgaaaccggcggcgggatgctcgaggtc
acccccgaaggtggcggcgcggcggtggcgatgggccgaccgcgcttcggctggaaggat
atcccgctcgactacgggatggacacgagcgaaatgccgctctcttgggacgggctcgaa
cgccccttcgcggtcaatgttggcaatccgcacgcggtgttcttcgtaaccgcgaccgag
gacgtcgagctcggctcgctcggcccgacgatcgaacgcgatcccgtctttcccgaaggc
gtcaatgtcggcgtcgcgagcgtggcttcgcgcgaccgcatctcgctgcgcgtgtgggaa
cgcggcgccgggctgacccgcgcctgcggcaccggcgcctgcgccgcggtggtcgccgcg
gtcgaacgcggtctcaccgatcgtattgtcaccgtcgccttgccgggcggcgagctcgtc
atctcttacgatgaagacgggcagatcaccatgcgcggacccgcgagcgaaagcttccgc
ggcagtttcgatcccgccgattacggtgccgcctga
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