Pseudoblastomonas marina: T8S45_07250
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Entry
T8S45_07250 CDS
T09636
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bmaa
Pseudoblastomonas marina
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmaa03016
]
T8S45_07250 (truB)
Enzymes [BR:
bmaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
T8S45_07250 (truB)
Transfer RNA biogenesis [BR:
bmaa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T8S45_07250 (truB)
Prokaryotic type
T8S45_07250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WPZ02651
LinkDB
All DBs
Position
complement(1466646..1467635)
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AA seq
329 aa
AA seq
DB search
MALNGWLILDKPRGLGSTQAVGKVKRAIRESGLPKAKVGHGGTLDPLAEGVLPIALGEAT
KLAGRMLDSDKTYEFTLQFGEETDTLDAEGSVVRRSDRRPPMAAISAVLEHFTGEIAQVP
PKYSALKVDGKRAYDLARKGEEVELATRKVTVHSLGFAGGERDFNEIEPSAFATTAGRPD
PYDPSAPLELAEAVTLVASVSKGTYIRSLARDIAHALGTVGHVTYLRRTKAGPFTERQAI
SLDILDENAKRASLEDLLLPLEAGLDGIPALSLDPEDAQAVRQGRVLSGMPQSDGLYCAT
HADVPVALVELEGGTTRVVRGFNLPDTAE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaacggctggctgatcctcgacaagccgcgcggcttgggttcgacccaggcg
gtcggcaaggtcaaacgcgcgatccgggagagcggcctgcccaaggccaaggtcggccat
ggcggcacgctcgatccgctcgccgaaggcgtgctgccgatcgcgctgggcgaggcgacc
aagctcgccggccgcatgctcgacagcgacaagacctacgaattcacgctccagttcggc
gaagagaccgacacgctcgatgccgagggctcggtcgtgcgccgctccgatcgtcgcccg
ccgatggccgcgatctcggcggtgctcgaacatttcaccggagagatcgcgcaggtcccg
cccaaatactcggcgctcaaggtcgacgggaagcgcgcttacgacctcgcgcgcaagggc
gaggaggtcgaactcgcgacgcgcaaggtcacggttcattcgctgggcttcgcgggcggc
gagcgcgacttcaacgagatcgagccgagcgccttcgccaccaccgccgggcggcccgac
ccctacgatccctcggccccgctcgagctggccgaggcggtgacgctggtcgcgagcgtc
tcgaaggggacatacatccgctcgctggcacgggatatcgcacatgcgcttggaacggtc
ggtcacgtcacctatctgcgccggaccaaggccggtcctttcaccgagcgacaggcgatt
tcgctggacatcctcgacgaaaacgctaagcgcgcgagccttgaagacctactcctgccg
ctagaggcggggctggacggtatcccggccctttccctcgacccggaagacgcgcaggcg
gtccgccagggccgggtcctttccggaatgccccaatccgacgggctctactgcgccacc
cacgctgacgtgccggtggcgctggtcgaactcgaaggcgggacgacgagggtcgtccgg
ggtttcaacctaccggataccgcggagtaa
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