Blastomonas marina: T8S45_07465
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Entry
T8S45_07465 CDS
T09636
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bmaa
Blastomonas marina
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmaa03032
]
T8S45_07465
03400 DNA repair and recombination proteins [BR:
bmaa03400
]
T8S45_07465
Enzymes [BR:
bmaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
T8S45_07465
DNA replication proteins [BR:
bmaa03032
]
Prokaryotic type
DNA Topoisomerases
T8S45_07465
DNA repair and recombination proteins [BR:
bmaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
T8S45_07465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WPZ02693
LinkDB
All DBs
Position
complement(1497437..1498444)
Genome browser
AA seq
335 aa
AA seq
DB search
MTKLIYVDDDMPGITRKGAGRGFAYYDPKGRLITDQAEKDRLNAIALPPAYTDEWYCPAP
NGHILATGYDARGRKQYRYHPDFRAQQESEKFDRCAAFGNLLPLIRDRVAKDLRSPNLTR
ERALASVVRLLDTGSIRIGNEGYTRENKSFGATTLRRKHAEVKGRSLVLRFTAKGGKRRE
MRVTDGSLANFVKRMQDLPGQHLFQFLDEDGDPHPIDSSDVNEYLRETMGEAFTAKDFRT
WHASVIGLGELAAAEGELTIKALTTEVGERLGNTPAMARKSYIHPAVIALVGRQEKWRAR
LRMPRKTKWHSREERALIELLEHAPSAAELLSLAG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagctgatctatgtcgacgacgacatgccgggcatcacgcgcaagggagcgggg
cgcggcttcgcctattacgatcccaaggggcgcttgatcaccgaccaggcggagaaggac
cgattgaacgcgatcgcgctcccgcccgcctacaccgacgaatggtattgccccgcgccc
aacggtcacatcctcgcgaccggctacgatgcgcgcgggcgcaagcaatatcgctaccat
cccgatttccgcgcgcagcaggaaagcgaaaagttcgatcgctgcgctgccttcggcaac
ctcctgccgctgattcgcgaccgggtggcgaaggatttgcgctcgcccaacctgacacgc
gagcgtgcgctcgcgagcgtggtgcggctgctcgataccgggagcatccggatcgggaac
gagggctatacccgcgagaacaagagcttcggcgcgaccaccttgcggcgcaagcatgcc
gaggtgaagggtcgcagcctcgtgctgcgtttcaccgccaagggcggcaaacggcgcgag
atgcgcgtcaccgacggcagtctcgccaatttcgtcaagcggatgcaggacctgcccggc
cagcacctgttccagttcctcgacgaggatggcgacccgcacccgatcgatagcagcgac
gtcaacgaatacctccgcgagacgatgggcgaggccttcaccgcgaaggatttccgtacc
tggcatgcgagcgtcatcggactgggcgagcttgccgctgccgagggcgagctgacgatc
aaggcgctgacgaccgaggtcggcgagcggctcggcaatacgcccgcgatggcgcgcaag
agctacatccatcccgccgtgatcgcgctggtcggacgccaggagaaatggcgcgccagg
ctgcgcatgccgcgcaagaccaagtggcacagccgcgaggagcgggcattgatcgagctg
ctcgaacacgcccccagcgcggccgagctgctgtcgctcgcgggctga
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integrated database retrieval system
