Pseudoblastomonas marina: T8S45_10120
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Entry
T8S45_10120 CDS
T09636
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
bmaa
Pseudoblastomonas marina
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bmaa03036
]
T8S45_10120
Chromosome and associated proteins [BR:
bmaa03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
T8S45_10120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
WPZ03193
LinkDB
All DBs
Position
2041901..2046136
Genome browser
AA seq
1411 aa
AA seq
DB search
MFQSDLFSDREKSRTVPLAFAIGEQIARRLADGCHLTRPDIAEFFAAQTDAQDWGSTWTI
DDYNNAVEIGALLWLREFSRIDLDTGFHEAAARFDWLEAALPPRHVRSEGQVEFQQFSTP
PILAWLMAKAASLISRDQILEPSAGNGALALWSDVRGCSLSLNEIDIARRDTLAHTFPHA
RLSAHDGELIAEFANGPSPSVILMNPPFARSRERGVDGRTAMRHLRSALRICASRGRLVA
ILPDGFDATAFVEDQENASLLLNIRLSGAFSRSGTGIAVRMVVIEKAALQDASTITEELA
DLSALHSCLAKLPDRAPRQPNIQRLPVRSVATSVSGTASRKPVAPFVTGVAQKSAAVALN
YHALAEPAPVPEQAGIYLPYRPSRVIMQDAPVHPTPLVESVAMGSVAAPVPEARPLLPAN
WQSDKLLSAAQCETLIYACEAFARDLPGQFRPSQQGTTVELAEDGHSYRQGFFLGDGTGA
GKGRQIVGVMMDRWLSGERRHVWITKNEALLEDARRDWEALGGLPLDIQPLSRWKLGTPV
TMPEGILFVTYPTLRSGRAEDTRLDQILAWAAEDFEGVIAFDEAHAMANALGSSSTRGKV
KGSEQGMAGLRLQNHLPRARVLYASATGASDIANLGYTARLGLWGPETAFPTHEAFMTDI
RAGGVAAMELVARDLKAQGLYLARALSFAGVEYEILEHQLTQAQVRIYDAYAEAWAIIHR
NLDEALEATRVVDEDSGDTLNRNAKAAALSIFEGTKQRFFAQLLLFMKLPSLIPAMEEAL
SDDHSVVVQLVSTAEAMLDRRLADLSDEELEALDIDLSPREYVIDYLAKSFPVRLMQVFT
DKDGNPRSEAMSDEYGNPVLCSRAIAARDALIEQLCALPPIATALDAIIEHFGTDAVAEV
TGRSRRLVMGRDGQQRLERRSASANVAEAQSFMEGTKRILVFSDAGGTGRSYHADLGARN
RQRRVHFLLEPGWRADNAIQGLGRTNRTNQASAPLFRPVTTDVKGERRFISTIARRLDAL
GALTRGQRQTGGQNLFDPADNLESDYAKDALSRWFHLLYDGKLEAVGFGDFVERTGLKLG
NPDGGLSDNLPTIQRWLNRILALPIALQNAIFEEYLGLVEARIEAAREAGTLDLGLETVR
VDRFEVFSDQLLRTDPVSGAETRLVSLEVTRHLRPLRLQRLVRMHEIGSPHAIPMRNARS
GKVALSVPARRLIADDGAVIERRRLLRPLKSANWAIDALAESHWEEIGVTSFTSAWRTEE
EEAANSPVTERVHLATGLLLPVWKRLPGDHVRVTRLVAEDGQSIIGREVLDIDLAAIADT
FGLSGVTGPAPDQIGDLVLASGKPLGLASHDPLTVKRSLVGGEQRLELIGFSPDRLDWYK
NKGCFTEIIRYRTRLFVPASKASSVLPALAA
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtcagaccttttctccgaccgtgaaaaatcacgcacggttccgctcgctttc
gcaatcggtgaacaaattgcccggcgacttgcggatggatgccacctcacccgacccgac
atcgccgaattcttcgccgctcaaaccgacgcgcaggactggggcagtacctggaccatc
gacgactataacaacgcggttgaaatcggagccttgctctggcttcgagaattctcacgg
atcgacctcgataccggtttccacgaggctgcagcgcggttcgattggctcgaggcagcc
ttgccgcctcgccacgtgcgcagcgagggacaggtcgaatttcagcagttctcaacgccg
ccgatccttgcctggctcatggccaaggccgcgtcgctcatctcgcgtgatcagattctc
gaaccgtcagccggtaatggcgcgcttgcgttgtggagtgacgttcgagggtgctcgctc
agtctcaacgagatcgatatcgcaaggcgcgatacgctggcacataccttccctcatgcc
cgtctatccgcacatgatggcgagttgatcgccgaattcgccaatggtccaagccccagc
gtcatcttgatgaaccctcccttcgcccgaagccgggagcggggcgtcgatggccgcacg
gcaatgcgccacttgcgcagtgcgcttcggatttgcgcgtcaagaggtcgcctcgtggcc
attctcccggacggctttgatgccacggcatttgtcgaagatcaggaaaacgcttcgctg
ctgctcaatatcaggttgtcgggcgcattctcacgaagcggaaccgggatcgcggtaaga
atggtcgtgatcgagaaggcggctcttcaggacgcctccacaatcacggaggagctcgcc
gatctctccgcactccattcctgcctggcgaagctgcccgatcgcgcgccgaggcaaccg
aacatccaacgccttccggtacgctcggttgcgacctcggtaagcggcactgcctcgcgc
aagccggtcgctcctttcgtgactggagtcgcccaaaaaagcgcggcagtcgcgctcaac
tatcacgccctggcagagcccgcacccgttcccgaacaggcgggtatttacctgccttac
cggccaagccgcgtcatcatgcaggatgcaccggtccacccgacgccgctcgtagaatcg
gttgcgatgggctcggttgcagcgcccgtgcctgaggcgcgtcccttgcttcctgcgaac
tggcagagcgacaaactgctatcggcggcacagtgcgaaacactgatctacgcttgcgag
gcattcgcccgcgaccttcccgggcagtttcgaccgagccaacaaggaacgacggtcgaa
cttgctgaggatggccactcctaccggcagggctttttcctcggtgatggtacgggcgca
ggcaaggggcgccaaattgtgggcgtcatgatggatcgctggctctcgggcgaacgccgt
cacgtctggatcaccaagaacgaggcattgctcgaagatgcgcgccgcgattgggaagcg
ctcggggggctcccgctcgatattcagccgctctcccgttggaagctcggaactccagta
acgatgcccgagggcattctcttcgtcacctatccgacgctgcgttcgggacgcgccgag
gacacgaggctcgatcagatcctcgcttgggctgccgaagatttcgagggtgtcattgcc
ttcgacgaagcgcatgccatggccaatgcgctcggctcttcgtccacccgcggcaaggtc
aaaggctcggagcagggcatggcaggtctcaggctgcaaaaccatctgccgcgcgcccgc
gtgctctacgcgtcggccacgggcgcatccgacatcgccaatctcggctacacagcccgg
cttggactgtggggccccgaaactgccttcccgacgcatgaggcattcatgaccgatatc
cgcgccggcggcgtcgcggcgatggaactcgtcgcccgcgatctcaaggcacaggggctc
taccttgcccgcgcgctgtcgtttgcgggggtcgaatacgaaatcctcgagcaccaactc
acccaagcgcaggtgcgaatctatgatgcctacgccgaggcttgggcgatcatccaccgc
aatctcgacgaagcgctcgaagcgacccgcgtggtcgacgaagacagcggtgatacgctc
aatcgcaacgccaaggctgcggcgctctcgatcttcgaaggcaccaagcagcggttcttt
gcgcagctcctgctctttatgaaactgccgagcctgatcccggcgatggaagaggcgctc
agtgatgaccattcggtggtcgtccaactggtctcgaccgccgaggcgatgctcgaccgt
cgcctggccgacctctccgacgaggaactcgaagcgctggacatcgatcttagcccgcgc
gaatacgtgatcgactacctcgccaaaagttttcccgtgcgcctgatgcaggttttcacc
gacaaggacggcaatccgcgctccgaagcgatgagcgatgaatacggcaatcccgttctt
tgctcgcgtgccattgccgcgcgcgacgcgctgatcgagcagctttgcgccttgccgccc
atcgctaccgcgctcgatgcgattatcgagcatttcggaaccgacgcggtcgccgaggtc
accggccgctcgcgccggcttgtcatggggcgtgacggtcagcagcggcttgagcgccga
agcgcaagcgccaatgtcgctgaagcgcaaagcttcatggaggggaccaagaggatcctg
gtcttctcggacgccggaggaacgggacgttcctaccacgcggacctcggtgcccggaac
cggcaacgccgggtccatttcctcctcgagccgggctggcgtgcggacaatgcgatccag
ggtctcggccggacaaaccgcaccaaccaggcctctgcgccgctgttccgcccggtcact
accgatgtgaagggcgaacgccgcttcatctcgaccatcgcgcgaaggctcgacgcattg
ggcgctctcacacgcggccagcgccagaccggcggtcagaacctgttcgaccctgccgac
aatctcgaaagcgattatgcgaaggacgcgctctcgcgctggttccacctgctttacgat
ggcaaactcgaggcggtcggtttcggggacttcgtcgagaggacaggcctcaagctcggg
aatcccgatggcgggctgagcgataaccttcccaccatccagcgctggctcaatcgcata
ctcgcgctcccgatcgcactgcagaacgccatcttcgaagagtatctcgggcttgtcgaa
gcgcggatcgaggccgcacgagaagcaggaacgctcgatctgggtctggaaactgtccgc
gtcgacagattcgaggtgttctctgatcaattgctccgcaccgatcctgtttcaggggcc
gaaacccgcctcgtctcgctcgaagtgacgaggcaccttcggcctctgcgtttgcagcgc
ctcgtgcggatgcacgagattggcagcccgcacgcaatcccgatgcgcaatgcgcgctcg
ggcaaggttgcgctgtcggttccagcccggcggctcatcgctgatgacggggccgtgatc
gaacgtcggcgcctgctgcgaccgctcaagtccgcgaactgggcgattgacgcactcgct
gagagccattgggaggaaattggcgtcacctcgttcaccagcgcatggcggaccgaggaa
gaagaggcggccaactcaccggtaactgagcgcgtccatctcgccaccggacttctgctt
ccggtctggaagcgcctcccaggcgatcatgttcgggtcacccggctcgttgccgaagat
ggtcagtcgatcatcggccgcgaggtgctcgatatcgatctcgctgcgattgccgatacc
tttggtctttccggcgttaccggtccggcgccggaccagatcggcgacctcgtcctcgcc
agcggcaaaccgctgggccttgctagccatgatccactcaccgtgaaacgctcgctggtc
ggcggcgaacagcgcctcgaactgatcggcttctcccccgatcggctcgactggtacaag
aacaagggctgcttcaccgagatcatccgctaccgcacgcgcctgttcgtcccggcgtcg
aaagcctcgtcggtcctccccgcgcttgccgcctga
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