Blastomonas marina: T8S45_10340
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Entry
T8S45_10340 CDS
T09636
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
bmaa
Blastomonas marina
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmaa03021
]
T8S45_10340
Transcription machinery [BR:
bmaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
T8S45_10340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
KORA
HTH_Tnp_ISL3
HTH_28
Imm2
Motif
Other DBs
NCBI-ProteinID:
WPZ03232
LinkDB
All DBs
Position
2094544..2095104
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AA seq
186 aa
AA seq
DB search
MSGAGYNPDEALVSQARAGNKRAFSQLVEHETGRLLALATRMLSSPSQAEDVVQDSLASV
WLTRHRLDPDKPIGPYLTTVVLNRCRDRLRRRKVAGFFGLSGDAELHSVADDVPGPEALA
VSREELNLVQAEIARMPVRLREALVLVTIEGRSQAEAADLLGTTEKAIETRVYRARNRLK
ERFEKL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggcgggctacaatccggatgaggcccttgtctcgcaggcgagggctggaaac
aagcgggctttcagccaactcgtcgagcatgaaaccggccggcttctcgcgctcgcgaca
cgcatgctttcctctccttcccaggccgaggacgttgttcaggacagcctggcttcggtg
tggctgacgcgtcatcggctcgatccggacaagccgatcggaccctatctgacaaccgtc
gtcctcaaccggtgccgggaccgtttgcgcaggcgcaaggtcgcgggctttttcggattg
tcgggcgatgccgaactccattccgtcgccgacgatgtcccgggtcctgaagcgctggcc
gtttccagggaagagctcaatctcgttcaggccgagatcgcacgaatgcccgtaaggctg
cgcgaagccctcgtgctcgtgaccatcgaggggcgtagccaggccgaggcggccgatctt
ctcggaacgaccgaaaaggcgatcgaaacccgcgtataccgcgcgcgcaacaggctgaag
gagcgcttcgaaaaactttga
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