Blastomonas marina: T8S45_11865
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Entry
T8S45_11865 CDS
T09636
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bmaa
Blastomonas marina
Pathway
bmaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
T8S45_11865 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmaa03400
]
T8S45_11865 (xth)
Enzymes [BR:
bmaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
T8S45_11865 (xth)
DNA repair and recombination proteins [BR:
bmaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
T8S45_11865 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WPZ03516
LinkDB
All DBs
Position
complement(2389176..2389949)
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AA seq
257 aa
AA seq
DB search
MKIATFNINGIRARLPRLIEWLEETQPDVVCLQELKAADDVFPEKDFQDIGYEAIWLGQK
GFNGVAILGKGQKPVEVTRGLHGDPEDDQSRYIEADYKGVRIAGLYLPNGNPHPGPKFEY
KLKWMERLRHRMAEIWAEEVPAVVCGDFNVIPHDDDVFDPARMAKDALMQPESRDAYQRL
LSDGWTDALRRMNPRGHVWTYWDYQAGAWQRDHGFRIDHLLLSPETADRLEAAGVDKEYR
GREKASDHTPVWVRLVA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcgaccttcaacatcaacggaatccgcgcgcggctcccacgcctcatcgaa
tggctcgaggagacacaacccgatgtggtctgcctgcaggagctgaaggcggccgacgac
gtcttccccgaaaaggatttccaggacatcggctacgaagcgatctggctcggccagaag
ggcttcaacggggtcgcgatcctgggcaagggccagaagccggtcgaggtgacacgcggg
ctccatggcgaccccgaggacgatcagtcgcgttacatcgaggccgattacaagggcgtg
cggatcgccgggctctacctgcccaacggcaacccgcatccgggcccgaagttcgaatac
aagctcaaatggatggagcggctgcgccaccgcatggccgagatctgggccgaggaagtg
cccgcggtcgtttgcggcgacttcaacgtcattccgcatgacgacgacgtgttcgacccg
gcgcgcatggcgaaggacgcgctgatgcaacccgaatcgcgcgatgcgtaccagcgactg
ctttccgacgggtggaccgatgcgctgcgccggatgaacccgcgcggacacgtgtggacc
tattgggactatcaggcgggcgcctggcaacgcgatcacggtttccggatcgaccacctg
ctgctttcgcccgagactgccgatcggctcgaggcggcaggcgtcgacaaggagtatcgc
ggacgcgaaaaggcgagcgatcacacccccgtctgggtccggctcgtcgcctga
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