Blastomonas marina: T8S45_12550
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Entry
T8S45_12550 CDS
T09636
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bmaa
Blastomonas marina
Pathway
bmaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T8S45_12550 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmaa03019
]
T8S45_12550 (recQ)
03400 DNA repair and recombination proteins [BR:
bmaa03400
]
T8S45_12550 (recQ)
Enzymes [BR:
bmaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T8S45_12550 (recQ)
Messenger RNA biogenesis [BR:
bmaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
T8S45_12550 (recQ)
DNA repair and recombination proteins [BR:
bmaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
T8S45_12550 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
HRDC
RQC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
WPZ03645
LinkDB
All DBs
Position
2512162..2513940
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AA seq
592 aa
AA seq
DB search
MAPLDAARATLKSMFGFADFRGRQEEVVERVLDRRSTLAVMPTGAGKSLCYQLPAIELEG
TCVVVSPLIALMHDQLRAARASGIRAATLTSADADWRETLDAFRSGALDLLYVAPERASQ
QGFRELLTSARIALFAIDEAHCVSEWGHDFRPDYRLLRPMMDAFPDVPRLALTATADAHT
RTDILTQLGIPEEGMVVAGFDRPNIRYAIHPRDSVGRQLQALLDSEPGPGIIYAPTRAAT
ERLAEKLSTTGREVRCYHAGLPPDVRAANQAAFVASENMVMVATVAFGMGIDKPDVRFVA
HAGLPKSIEAYYQETGRAGRDGDPAQAQLFWGADDFARARMRVAEVDAGRQAGERARLDA
LGALVETAGCRRAVLLRHFGEDPPETCGNCDNCCDPPKSIDATVVAQKYLSAVARTRQMF
GAGYVEGILTGQSSDRAEKNGHDSLSVFGIVEGEEALLLKPVRRALMVRGALLPTEHGGM
MLGGEARAYLKGERELDLVLPPKKQRRRQGRSGRDSSPNPVGDPLFDALRELRRELAEEG
KVPPYVIFHDATLREFAARRPASRAEMGEVSGVGAKKLEAFGDAFLAVIRQY
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggctccgctcgacgcggcgcgcgcgacgctcaaatcgatgttcggcttcgccgacttc
cgggggcggcaggaagaggtcgtcgagcgcgtgctcgatcggcgctcgacgcttgccgtg
atgcccaccggcgccggcaagtcgctgtgctaccagctcccggcgatcgaactcgagggc
acctgcgtggtcgtatcgccgctgatcgctctgatgcacgaccagctgcgcgcggcgcgg
gccagtgggatccgcgcagcgacactcaccagcgccgacgccgactggcgcgagacgctc
gacgcgttccgcagcggcgcgctcgacctgctctacgtcgcgcccgaacgcgccagccag
cagggcttccgcgagctgctcacgagcgcccgcatcgcgctgttcgcgatcgacgaggcg
cattgcgtgtccgaatgggggcacgacttccgtccggactatcgcctgctgcgtccgatg
atggacgcctttcccgacgtgccgcggctcgcgctcaccgcgaccgccgatgcgcatacc
cgcaccgatatcctgacccagctcgggattcccgaggaggggatggtggtcgccgggttc
gaccggcccaatatccgttacgcgatccacccgcgcgattcggtcgggcggcaattgcag
gcgctgctcgacagcgagccggggccagggatcatctacgcccccacccgcgccgcgaca
gagcggctggcggaaaagctctcgaccaccgggcgcgaggtgcgttgctaccatgccggg
ctgccgcccgatgtccgcgccgcgaaccaggcggcgttcgtggcaagcgagaacatggtg
atggtcgcgacggtcgccttcgggatggggatcgacaagcccgacgtgcgcttcgtcgcg
catgccggcctgcccaagtcgatcgaggcctattaccaggaaaccgggcgcgcgggacgc
gatggcgacccggcgcaggcgcaactgttctggggtgccgacgatttcgcccgcgcgcgg
atgcgggtggccgaggtcgatgccggacgccaggcgggcgaacgcgcacggctcgatgcg
ctcggcgcgctggtcgagaccgcgggctgccgccgcgcggtgctgctcaggcatttcggc
gaagacccgcccgaaacctgcggcaattgcgacaattgctgcgatccgcccaagtcgatc
gacgccaccgtcgtcgcccagaaatacctctccgccgtcgcgcgcacacggcagatgttc
ggcgcgggctatgtcgagggtatcctgaccgggcagtcctccgaccgggcggaaaagaac
ggccatgacagcctttcggtgttcgggatcgtcgagggcgaggaagcgctgctgctgaag
ccggtgcggcgcgcgctgatggtgcgcggggcactgctcccgaccgaacatggcggaatg
atgctcggcggagaggcgcgcgcctatctcaagggcgagcgcgaactcgatctcgttctg
ccccccaagaagcagcgccggcggcaaggacgctccgggcgtgacagctcccccaacccg
gtcggcgatccgctgttcgacgcgctgcgcgaactccgccgcgaactggctgaggagggc
aaggttccgccctacgtcatcttccacgatgccaccttgcgcgaattcgccgcgcgccgc
cccgccagccgcgccgagatgggcgaggtcagcggggtcggggcgaagaaactcgaggcc
tttggcgatgcgttcctcgcggtgatccgccaatattga
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