Burkholderia mallei 2002734299: BM45_1234
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Entry
BM45_1234 CDS
T03872
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bmab
Burkholderia mallei 2002734299
Pathway
bmab03410
Base excision repair
bmab03430
Mismatch repair
bmab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BM45_1234 (recJ)
03430 Mismatch repair
BM45_1234 (recJ)
03440 Homologous recombination
BM45_1234 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmab03400
]
BM45_1234 (recJ)
DNA repair and recombination proteins [BR:
bmab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BM45_1234 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BM45_1234 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BM45_1234 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
AJX02128
UniProt:
A0AAX1X7V2
LinkDB
All DBs
Position
1:complement(1331310..1333004)
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AA seq
564 aa
AA seq
DB search
MTRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQA
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSL
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
HQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSIPGFHLRDAIDLISKREPDLI
VTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARAT
LAFRLASDTWNGTTRVQLIVEHAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcgtcacccgctccgccgttcccgccgcgctcgacgcgctcgcccgccac
gggctgcatcccgtgctcgcccgcctctacgcggcgcgcggaatcgcctcgcccgccgac
gtcgaaaccgcgctgtcgcgcctcgtgccgcccgcgcagctcaagggctgcgcgcaggcc
gccgcgctcctcgccgacgcgctcgaggccggccgcaagatgctcgtcgtcgccgattac
gactgcgacggcgcgaccgcctgcgcggttgccgtgcgcggcctgcggatgttcggcgcg
aagatcgattacctcgtgccgaaccgcttcgaatacggctacgggctcacgcccgagatc
gtcgagctcgcggccgcgagaaagcccgacctgctgatcaccgtcgacaacggaatcgcg
agcgtcgacggcgtcgcggccgcgaacgcgcgcggcatcgacgtgctcgtcaccgatcac
catctgcccggcgacacgctgcccgccgcgcgcgcgatcgtcaatccgaaccagcccggc
tgcgcgttcccgagcaagcatatcgcgggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgcgcgcgcggcgcgttcggcgacgcccgccccgagccgcggctc
gacgggctgctcgatctcgtcgcgctcggcacggtggccgacgtcgtgcggctcgacggc
aacaaccgcgtgctcgtcgcgcaaggcctgcagcgcatccgcaacggacggatgcagccc
ggcatcgccgcgctctttcgcgcggccgcgcgcgacgcgcgcagcgcatcgggcttcgat
ctcggcttcggcctcggcccgcgcctgaacgcggcgggccgcctgtcggacatgtcgctc
ggcatcgaatgcctgacgaccgacgacgtgggccgcgcgtgggaactcgcgcagcagctc
gacgcgatgaaccgcgagcggcgcgagatcgaggccggcatgcagcagcaggcactcgcc
gatctcgcgtcggtcgaccccgccgaggcggccaccatcacgctcttcaaccccgaatgg
caccagggcgtgatcgggatcgtcgcggggcggctcaaggagcgctttcaccggccggcg
ttcacgttcgcgcacgcggacgacggcggcgcgcgcgtgaagggctccggccgctcgatt
cccggcttccatctgcgcgatgcgatcgacctgatctcgaagcgcgaacccgatctgatc
gtcacgttcggcggccacgcgatggccgcgggcgtcacgctcgagaccgcgaacgtgccg
cgcttcgcggccgcgttcgagacggtcgcgcgcgaatggctgtccgacgacgcgctcgcg
cgggtgatcgagacggacggcgatctcgaggatgcctacttcacgccgcaggtggtcgag
ctgctcgatgcggccgtctggggccagggcttcccggcgccgctcttctcgggcgaattc
gacgtcgcctcgcaggcgctcgtcaaggacaagcacctgaagctgcaattgacgcgcggc
cgccagcgcttcaacgcgatctggttcaatcacgcggagccgctgcccgcgcgcgcgacc
ctcgcgttccggctcgcgagcgatacgtggaacggcacgacgcgcgtgcaactgatcgtc
gagcacgcggcgtag
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