| Entry |
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| Symbol |
rpoB
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| Name |
(GenBank) DNA-directed RNA polymerase, beta subunit
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| KO |
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| Organism |
bmab Burkholderia mallei 2002734299
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:bmab00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BM45_137 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:bmab03021]
BM45_137 (rpoB)
03400 DNA repair and recombination proteins [BR:bmab03400]
BM45_137 (rpoB)
Enzymes [BR:bmab01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BM45_137 (rpoB)
Transcription machinery [BR:bmab03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BM45_137 (rpoB)
DNA repair and recombination proteins [BR:bmab03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BM45_137 (rpoB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:124484..128590
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| AA seq |
1368 aa
MQYSFTEKKRIRKSFAKRSIVHQVPFLLATQLESFSTFLQADVPTAQRKSEGLQAAFTSV
FPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQMEFVPERLRGEVARFDITDREGKVIVQKDKRINAKHIRDLEAAKTKYISVPEDYLLG
RVLAKNVVDGDTGEVIANANDEITEGVLEKLREAKIKEIQTLYTNDLDQGPYISSTLRVD
ETVDKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEI
TGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDSKVTDQIDYLSAIEEGRYMIAQANAAIGDDGALVDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTVAVDSGT
TVQALRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMG
DKVSRGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAVQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLARQTKIEELRVFLTKIYNESGRAEDLESFSDDEILELAKNLREGVPFAT
PVFDGATEEEMSKMLDLAFPDDIAEQLDMNPSKNQVRLYDGRTGEPFERRVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN |
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| NT seq |
4107 nt +upstreamnt +downstreamnt
atgcaatattccttcaccgagaagaagcgcattcgcaagagtttcgcgaagcgttccatc
gttcaccaagtgcctttcctgctggccacccagcttgaatcattcagcacatttctgcaa
gccgatgtgcccaccgcgcaacgcaagtccgaggggttgcaggccgccttcacgtcggtg
tttcccatcgtctcgcataacggcttcgctcgtctcgagttcgtgagctatgcgttgtcg
tcgccggcgttcaacatcaaggaatgtcagcagcgcggcctgacctactgctcggcgctg
cgcgcgaaggtgcgcctcgtgctcctcgacaaggagtcgccgagcaagcccgtcgtcaag
gaagtgaaggaacaggaagtgtacatgggcgagattccgctcatgacgccgaccggttcg
ttcgtcatcaacggcaccgagcgcgtgatcgtgtcgcagttgcaccgttcgcccggcgtg
ttcttcgagcacgacaagggcaagacgcacagctcgggcaagctgctgttctccgcgcgg
atcattccgtaccgcggctcgtggctcgacttcgaattcgatccgaaggacgtgctgtat
ttccgcgtcgaccgccgccgcaagatgccggtcacgatcctgctgaaggcgatcggcctc
acgcctgagcagatcctcgcgaacttcttcgtcttcgacaacttcacgctgatggacgaa
ggcgcgcagatggagttcgtgcccgagcgtctgcgcggcgaagtcgcgcgcttcgacatc
accgatcgcgaaggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatt
cgcgatctcgaagccgcgaagaccaagtacatctcggtgcccgaagactatctgctcggc
cgcgtgctggcgaagaacgtcgtcgacggcgacacgggtgaagtgatcgcgaacgcgaac
gacgagatcaccgaaggcgtgctcgagaagctgcgcgaagcgaagatcaaggaaatccag
acgctctacacgaacgatctggaccagggcccgtacatctcgtcgacgctgcgcgtggac
gaaaccgtcgacaagacggccgcgcgcatcgcgatctaccggatgatgcgcccgggcgag
ccgccgacggaagaagccgtcgaggcgctcttcaaccgcctgttctacagcgaagacgcg
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtcggccgtgacgagatc
acgggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagatcctcgtcgag
ctgcgcaacggcaagggcgaagtcgacgacatcgaccacctcggcaaccgtcgcgtgcgc
tgcgtcggcgaactggcggaaaaccagttccgcgcgggcctggtgcgcgtcgagcgcgcg
gtgaaggaacgtctcggccaggccgagagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgattcgcgagttcttcggttcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgcgtgtccgcactgggc
ccgggcggtctcacgcgcgagcgcgccggcttcgaagtccgcgacgtgcacccgacccac
tacggccgcgtgtgtccgatcgagacgccggaaggtccgaacatcggcctcatcaactcg
ctcgcactgtacgcgcacctgaacgaatacggcttcctcgagacgccgtaccgcaaggtc
gtcgacagcaaggtgaccgaccagatcgactatctgtcggcgatcgaggaaggccgctac
atgatcgcgcaggcgaacgccgcgatcggcgacgacggcgcgctcgtcgacgaactggtg
tcgtcgcgcgaagccggcgaaacgatgatggtcacgccggaccgcatccagtacatggac
gtcgcgccgtcgcagatcgtgtcggtggcagcctcgctgattccgttcctcgagcacgat
gacgcgaaccgcgcgctgatgggctcgaacatgcagcgtcaggccgtgccgtgtctgcgt
ccggagaagcccgtcgtcggtaccggcatcgagcgcaccgtggcggtcgactcgggcacg
acggtgcaggcgctgcgcggcggcgtcgtcgattacgtcgacgcgggccgtatcgtcatt
cgcgtgaacgatgacgaagcggtcgcgggcgaagtcggcgtcgacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaatcagcgtccgatcgtgaagatgggc
gacaaggtctcgcgcggcgacgtgctggccgatggcgcatcgaccgacctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagcgcgtcgtcgcggacgatcgctacacgtcgatccacatcgaa
gagctgaacgtcgtcgcacgcgacacgaagctcgggccggaagaaatcacgcgcgacatc
tcgaacctcgcggaagtccagctcggccgtctcgacgaatcgggcatcgtgtacatcggt
gcggaagtcgaagcgggcgacgtgctggtcggcaaggtcacgccgaagggcgagacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcaccgtgatcgacgttcaggtgttc
acgcgcgaaggtatccagcgtgacaagcgcgcgcaacagatcatcgacgacgaactgaag
cgctaccgtctggacttgaacgaccagctgcgcatcgtcgaaggcgacgcattccagcgt
ctcgcgcgcatgctcgtcggcaaggtcgcgaacggcggtccgaagaagctcgcgaagggc
acgaagatcgaccaggcgtacctggaggatctcgaccactaccactggttcgacatccgc
ctcgcggacgacgaagcggccgtgcagctcgaagcgatcaagaactcgatcgaagagaag
cgccaccagttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtgaagcgccgcctacag
cctggcgacaagatggcgggccgtcacggtaacaagggtgtcgtgtcgaagatcgttccg
gtcgaagacatgccgtacatggccgacggccgtccggccgacgtcgtgctgaatccgctc
ggcgtgccgtcgcggatgaacgtggggcaggtcctggaagtgcacctcggctgggccgcg
aagggcctcggctggcgtatcggcgagatgctcgcgcgtcagacgaagatcgaagagctg
cgtgtgttcctgacgaagatctacaacgagtcgggccgtgcggaagacctcgagagcttc
agcgacgacgaaatcctcgaactcgcgaagaatctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgacggcgcgaccgaggaagaaatgtcgaagatgctcgacctcgcgttcccg
gacgacatcgccgaacagctcgacatgaatccgtcgaagaaccaggtgcgcctgtacgac
ggccgcacgggcgagccgttcgagcgccgcgtgacggtgggctacatgcactacctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgttcgacgggcccgtactcgctcgtc
acgcagcagccgctcggcggcaaggcgcagttcggcggccagcgcttcggtgaaatggaa
gtgtgggcgctcgaagcgtatggcgcttcgtacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgaccggccggaccaaggtttatgaaaacctggtcaagggcgaccatgtc
atcgacgccggcatgcccgagtcgttcaacgtgttggtgaaggaaatccggtcgctcggt
atcgacatcgacctggaccggaactaa |
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