Bartonella machadoae: LNM86_01270
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Entry
LNM86_01270 CDS
T08469
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bmac
Bartonella machadoae
Brite
KEGG Orthology (KO) [BR:
bmac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmac03016
]
LNM86_01270 (truB)
Enzymes [BR:
bmac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LNM86_01270 (truB)
Transfer RNA biogenesis [BR:
bmac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LNM86_01270 (truB)
Prokaryotic type
LNM86_01270 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UNE55644
LinkDB
All DBs
Position
complement(253282..254241)
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AA seq
319 aa
AA seq
DB search
MSQQRKKKGRSISGWVILDKPKGMRSTEAVSQIKRLFHAQKAGHAGTLDPLASGLLPIAL
GEATKTVPYVMQGIKTYRFHIVWGEERSTDDLEGEITKTSLKRPTQEEILAVLPQYTGVI
LQTPPQFSAIKIAGHRAYDLAREGEIVEIPPRQVEIETFKLIETITKERALFEITCGKGT
YVRSLARDIGRDLGCYGYIADLRRIAVAPFYEDDLITWDKLKTVALDQNATSENDTSPKR
NFSKLDALLIETSAALDCLTHYALNKTQAQRVMMGNPVSLCHHDAPPDENEVCVIYKDQL
LAIGSLDKNLFKPKRIFTI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcaacgcaaaaaaaaaggtcgttctatttctggctgggtcatacttgataaa
ccaaaaggaatgagatcaacagaagctgtctctcaaatcaaaaggctttttcatgcacaa
aaagcagggcatgctggcacacttgatcctctcgcttctggcctcctaccaattgcattg
ggtgaagcaaccaaaaccgttccttatgttatgcaaggtataaaaacctaccgttttcat
atcgtttggggtgaagagcgttcaacagatgacctagagggtgaaataacaaaaacatcg
cttaagcgtccaacgcaagaagaaatacttgctgttctcccacaatatacaggtgttatt
ttgcaaacacctccacaattttcggcaattaaaattgccggtcatcgagcctatgattta
gcacgtgaaggtgaaattgttgaaattccaccacgccaagtagaaatagaaacttttaaa
ttaatagaaactattactaaagagcgtgcgctctttgaaataacctgcggaaaaggaacc
tacgtgcgttccttagcgcgtgatatagggcgtgatcttggttgttatggttatattgct
gatttaagacgtatcgcagtagcacctttttatgaagatgatctcattacatgggataaa
ctcaaaacagtagcgttagatcaaaatgcaacaagtgaaaatgatacttccccaaaaaga
aacttttcaaaacttgatgcacttttaattgaaacaagtgctgctctcgattgcctcact
cattatgctcttaataaaacccaagcccagcgagtcatgatgggtaatccagtatccctt
tgtcatcacgacgctcctcctgatgaaaatgaagtttgcgtcatttacaaagatcaactt
cttgcgataggctcccttgataaaaacttgttcaagccaaagcgtatctttacaatttga
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