Bartonella machadoae: LNM86_07785
Help
Entry
LNM86_07785 CDS
T08469
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bmac
Bartonella machadoae
Pathway
bmac03410
Base excision repair
bmac03430
Mismatch repair
bmac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LNM86_07785 (recJ)
03430 Mismatch repair
LNM86_07785 (recJ)
03440 Homologous recombination
LNM86_07785 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmac03400
]
LNM86_07785 (recJ)
DNA repair and recombination proteins [BR:
bmac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LNM86_07785 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LNM86_07785 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LNM86_07785 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Phage_coat
QRPTase_C
Motif
Other DBs
NCBI-ProteinID:
UNE55556
LinkDB
All DBs
Position
complement(1601239..1603020)
Genome browser
AA seq
593 aa
AA seq
DB search
MQQSRYFLNVKSSACGQAWLDALDIQGINNARAISQKFGFPDELARVLSARDVDESEAVT
FINPTLRTLMPDPESFADLQCAAERIVKAILEKEKVAVFGDYDVDGACSSALVARFLRCL
GVEVKIYIPDRIVEGYGPNEQAMRMLVQEGANLIITVDCGANSPEAVKAARLEGADVVVL
DHHQMSEVHQEAIALVNPNRPDDFSGQGHLCAAGVVFVTLAWVNHLLKKRKLREDLPDLL
SMLDLVALATICDVVPLQGVNRAFVVKGLQVARSLYNHGIVALTKVARIGEPLNSFHLGF
LLGPRINAGGRIGDQALGARLLSCEDKEEAEKIAEQLNQLNQERQEMESIQLAQAESYID
SLYQNQDTPLSLVIAHQEWHPGVIGILASRLKERFFCPVFAIALKEDGSGVGSGRSMSGI
DLGALVREAVTLNLLEKGGGHSMAAGITIQATKIEAFRKWLEEKVSVMVSQLRAKKSLRI
DGCLSASGVNKELCDMIEKAGPFGSGNTTPVFVLPSHRLVNLCEVGKGHLRLVMANIEGN
KLQGIAFRAVGTPLGHFLSENIGEMIHLAGNLSLNYWNGMITPQIRVIDAAAV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagtctcgttattttctcaatgttaaatcttctgcttgtgggcaagcttggttg
gatgctcttgatattcaagggataaataacgcgcgtgcgatttctcaaaaatttggtttt
ccagatgagcttgctcgcgttctgtcggcaagagatgtggatgaatctgaagcggttact
tttatcaacccaacattgcgtacactcatgcctgatccagaaagttttgccgatctgcaa
tgtgcggcagagcgcatcgttaaggctattttagagaaagagaaggttgcggtttttggt
gattatgacgtcgatggtgcctgttcatcagcactcgtagcgcgttttctgcgttgtttg
ggtgtggaagtaaaaatttatattcctgatcgtatcgtggaaggatatgggcctaatgag
caagcaatgcggatgctcgtgcaagaaggtgccaatcttattattaccgttgattgtggt
gcaaacagtccagaggcagttaaagcagcaaggcttgaaggcgctgatgtcgtggtttta
gatcatcatcaaatgtctgaggttcatcaagaggctatcgcccttgtcaatcctaatcgc
cccgatgatttttctgggcaagggcatttgtgtgctgctggcgttgtttttgttacgtta
gcatgggttaatcatttgttgaagaaaaggaagttgagagaagatcttcctgatctgctc
agtatgcttgatcttgttgcattggcaaccatctgtgatgttgtaccattacagggggtg
aatcgtgcctttgtggttaaagggctccaagtagcacgctctctgtataatcacggcata
gtggctttaacaaaggttgcgcggataggtgaaccgcttaatagttttcatttgggtttt
ttattaggtcctagaattaatgcgggaggacgtattggcgaccaagctttgggagcacgt
ttgcttagctgtgaggataaagaggaagctgaaaaaatagcagaacaattgaatcaactg
aatcaagagcgtcaagagatggagagtattcaattggcgcaagcagaatcttatattgat
tctctttatcaaaatcaggatacgcctctgtcacttgtcattgcgcatcaagaatggcat
ccaggtgttattggtattcttgcatctcgattaaaagagcgttttttttgtcctgttttt
gccattgctttgaaagaagatggaagtggcgtaggatcgggacgttcaatgagtggcata
gatttgggagcgcttgttcgtgaagctgtaaccttaaatttactagaaaaaggcggcggg
catagtatggcagctgggattacaatccaagcgacaaaaattgaagcttttcgaaaatgg
ctggaagagaaagtctctgtaatggtgtcacagttgcgtgctaaaaagtctcttcggata
gatgggtgcctttctgcttctggtgtcaataaagagctttgtgacatgattgaaaaagca
gggccatttggttcagggaatacgacacctgtttttgttctgccttctcatcggttagtt
aatctgtgtgaggtgggaaaggggcatcttcgccttgttatggctaatattgaaggaaat
aaactgcaaggcattgcttttcgtgctgtgggaacaccacttggtcattttctttctgaa
aatattggtgaaatgatccatttggctggtaatctcagtttgaattattggaatggaatg
attactccacaaatacgtgttattgatgcagcagcggtttaa
DBGET
integrated database retrieval system
