Bartonella machadoae: LNM86_08665
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Entry
LNM86_08665 CDS
T08469
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bmac
Bartonella machadoae
Brite
KEGG Orthology (KO) [BR:
bmac00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LNM86_08665 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmac03021
]
LNM86_08665 (rpoD)
Transcription machinery [BR:
bmac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LNM86_08665 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UNE53701
LinkDB
All DBs
Position
complement(1799451..1801463)
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AA seq
670 aa
AA seq
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MATKVKQKDNVEVTSQASLDSPLLDFSDDAIKKMVKLAKKNGYVTMDELNAVLPSEEVTS
EQIEDILAMFSDMGINVVDDEDEIDSEPDEEEVTIEGGDLVEASSHAIATTTNKREITDR
TDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIWREELKE
QRILLREIIDLEMTYAGPEAKQAPIVERSEVDKIKEEKIPSSMRNMEGIAGDRGAEEEDE
EDDEANLSLAAMENELCPQVMETLDFIAQTYVKLRKLQDQHVESSLAERKEGALTPSQRK
KYMQLKGELIQAVKSLSLNQNRIESLVEQLYDINKRLIHNEGKLKRVANSYGIGHEDFLK
EYQGRELDADWINYVATLPGSGWKEFSKREAKEIQRLRSEIQNLAQETAISIGEFRRIVT
QVQKGERESTIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRR
GYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEEL
SNKLSMPLEKVRKVLKIAKEPISLETPVGDEDDSHLGDFIEDRNALLPIDAAIQANLRDT
TTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSR
SRKLRSFLDS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggttaaacagaaagataatgtggaagtaacaagccaagcgagtttggat
agtcctcttcttgatttttctgatgacgccattaaaaaaatggttaagcttgctaaaaaa
aatggttatgtgacgatggacgaactgaatgcagttcttccatctgaagaggtgacgtcg
gaacagattgaagatatcttggcgatgttttctgatatgggtattaatgttgtcgacgat
gaagatgaaattgattctgaacccgatgaagaagaagttacaatagagggcggagatctc
gtagaggcctctagtcatgcaatcgcaacaacaacgaataagcgtgaaattacagatcgt
acagatgatccagtgcgtatgtatttgcgtgaaatgggggctgttgagctgctgtcgcga
gaaggcgaaattgccattgccaagcgtattgaagcagggcgggagacaatgattgctgga
ctttgtgagagccctttgactttccaagccctcattatttggcgggaagaattgaaagag
cagcgtattctcctgcgtgaaattattgatcttgaaatgacttatgctggtcccgaggct
aagcaggctcctattgttgagcgaagtgaagttgataagataaaagaggaaaaaatacct
tcgagcatgcgtaatatggagggaattgcaggagatagaggcgctgaggaggaagatgaa
gaggatgacgaagcgaatttgtcgcttgctgcaatggaaaatgaactctgtcctcaagtc
atggaaacattggattttattgcgcagacttatgtgaaattgcggaaattgcaagatcag
catgttgagagtagtttggcagagcgtaaagagggcgctcttacgccgtctcagagaaaa
aaatatatgcaattaaagggtgagttgattcaagcagtgaaatccctttcgttgaatcaa
aatcgtatcgaatctttggttgagcagctttatgatatcaataagagactgattcataat
gagggtaagctgaagcgggttgctaatagttatggcattggtcatgaggattttttgaaa
gaatatcaaggacgtgaattagatgctgattggataaattatgttgcgactttgccagga
tctgggtggaaagaattctcaaagcgtgaagcaaaagaaattcaaagattgcgtagcgaa
atacaaaatcttgcacaagaaactgctatttcaattggtgaatttcgtcgaattgttacg
caagtgcaaaaaggtgaacgcgaatcaacaattgctaaaaaagaaatggtagaggctaat
cttcgtctcgtgatttcaattgcaaaaaaatacacgaatcgtggcttgcaatttcttgat
cttattcaagaaggaaatattggtttgatgaaagccgtggataaatttgaataccgtcgt
ggatacaaattttcaacttatgcaacatggtggattcgtcaggcaattacgcgttcaatt
gctgaccaggcacgtactattcgtatccctgttcatatgattgagacaattaacaaaatt
gttcgtacatcgcgacagattctccatgaaattgggcgcgagcctacaccagaagaattg
tcaaacaagctttctatgccattagaaaaagtacgaaaagtccttaaaattgcaaaagag
cctatttcccttgaaacgcctgtgggtgatgaagatgattcgcatttgggcgattttatt
gaggatagaaatgcattattgccgattgatgctgctattcaggcgaatctacgggataca
acaacgcgcgtccttgcttcattgacaccgcgtgaagaacgtgttttgcgaatgcgtttt
ggtatcgggatgaatacagatcacacgttggaggaagttgggcaacaattttcagtgaca
agggagcgtattcgacaaattgaagcaaaagcgcttcgtaagttgaagcatcctagccgt
tcacggaaattgcgtagttttctcgattcttaa
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